RNA–Protein interactions for RNA: ENST00000622961.3

CR381653.1-201, humanhuman

TSL 3 BASIC

Gene CR381653.1, Length 812 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR381653.1-201ENST00000622961 NISCHQ9Y2I1 1504 aa37.46■■■■□ 3.59
CR381653.1-201ENST00000622961 CCDC180Q9P1Z9 1646 aa33.73■■■□□ 2.99
CR381653.1-201ENST00000622961 ABCC9O60706 1549 aa33.38■■■□□ 2.93
CR381653.1-201ENST00000622961 RB1CC1Q8TDY2 1594 aa31.9■■■□□ 2.7
CR381653.1-201ENST00000622961 NACADO15069 1562 aa31.71■■■□□ 2.67
CR381653.1-201ENST00000622961 UNC13AQ9UPW8 1703 aa31.41■■■□□ 2.62
CR381653.1-201ENST00000622961 MYO15BQ96JP2 1530 aa31.34■■■□□ 2.61
CR381653.1-201ENST00000622961 DCAF8L2P0C7V8 631 aa31.22■■■□□ 2.59
CR381653.1-201ENST00000622961 ZCCHC6Q5VYS8 1495 aaKnown RBP31.14■■■□□ 2.57
CR381653.1-201ENST00000622961 DNAJC5BQ9UF47 199 aa31.07■■■□□ 2.56
CR381653.1-201ENST00000622961 BICRAQ9NZM4 1560 aa31.05■■■□□ 2.56
CR381653.1-201ENST00000622961 DCAF1Q9Y4B6 1507 aa30.99■■■□□ 2.55
CR381653.1-201ENST00000622961 PABPN1Q86U42 306 aaKnown RBP eCLIP30.95■■■□□ 2.55
CR381653.1-201ENST00000622961 SCRIBQ14160 1630 aa30.65■■■□□ 2.5
CR381653.1-201ENST00000622961 SHROOM4Q9ULL8 1493 aa30.6■■■□□ 2.49
CR381653.1-201ENST00000622961 AEBP2Q6ZN18 517 aaPredicted RBP30.39■■■□□ 2.46
CR381653.1-201ENST00000622961 CC2D2AQ9P2K1 1620 aa30.25■■■□□ 2.43
CR381653.1-201ENST00000622961 EIF4G1Q04637 1599 aaKnown RBP30.22■■■□□ 2.43
CR381653.1-201ENST00000622961 CECR2Q9BXF3 1484 aa30.04■■■□□ 2.4
CR381653.1-201ENST00000622961 SMARCA4P51532 1647 aa29.28■■■□□ 2.28
CR381653.1-201ENST00000622961 NCAPD3P42695 1498 aa29.2■■■□□ 2.26
CR381653.1-201ENST00000622961 ATAD2BQ9ULI0 1458 aa29.16■■■□□ 2.26
CR381653.1-201ENST00000622961 SMARCA2P51531 1590 aa29.13■■■□□ 2.25
CR381653.1-201ENST00000622961 HMGXB3Q12766 1538 aa29.12■■■□□ 2.25
CR381653.1-201ENST00000622961 BAZ1AQ9NRL2 1556 aaPredicted RBP29.09■■■□□ 2.25
CR381653.1-201ENST00000622961 PEG3Q9GZU2 1588 aa29■■■□□ 2.23
CR381653.1-201ENST00000622961 BAZ1BQ9UIG0 1483 aaKnown RBP28.89■■■□□ 2.22
CR381653.1-201ENST00000622961 MROH2BQ7Z745 1585 aa28.88■■■□□ 2.21
CR381653.1-201ENST00000622961 ERCC6Q03468 1493 aa28.77■■■□□ 2.2
CR381653.1-201ENST00000622961 CHIC1Q5VXU3 224 aa28.75■■■□□ 2.19
CR381653.1-201ENST00000622961 NESP48681 1621 aa28.75■■■□□ 2.19
CR381653.1-201ENST00000622961 CUX2O14529 1486 aa28.73■■■□□ 2.19
CR381653.1-201ENST00000622961 LAMC3Q9Y6N6 1575 aa28.62■■■□□ 2.17
CR381653.1-201ENST00000622961 WIZO95785 1651 aa28.61■■■□□ 2.17
CR381653.1-201ENST00000622961 THOC2Q8NI27 1593 aaKnown RBP28.58■■■□□ 2.17
CR381653.1-201ENST00000622961 KIF21AQ7Z4S6 1674 aa28.54■■■□□ 2.16
CR381653.1-201ENST00000622961 DNAJC5Q9H3Z4 198 aa28.38■■■□□ 2.13
CR381653.1-201ENST00000622961 PDS5BQ9NTI5 1447 aa28.29■■■□□ 2.12
CR381653.1-201ENST00000622961 RSF1Q96T23 1441 aaPredicted RBP28.26■■■□□ 2.12
CR381653.1-201ENST00000622961 CADPSQ9ULU8 1353 aa28.26■■■□□ 2.12
CR381653.1-201ENST00000622961 TOP2AP11388 1531 aaKnown RBP28.23■■■□□ 2.11
CR381653.1-201ENST00000622961 WDR62O43379 1518 aa28.15■■■□□ 2.1
CR381653.1-201ENST00000622961 MRC2Q9UBG0 1479 aa28.15■■■□□ 2.1
CR381653.1-201ENST00000622961 PRDM2Q13029 1718 aa28.06■■■□□ 2.08
CR381653.1-201ENST00000622961 CEP164Q9UPV0 1460 aa28.06■■■□□ 2.08
CR381653.1-201ENST00000622961 CFTRP13569 1480 aa28.05■■■□□ 2.08
CR381653.1-201ENST00000622961 FANCD2Q9BXW9 1451 aa28.02■■■□□ 2.08
CR381653.1-201ENST00000622961 URB2Q14146 1524 aaKnown RBP27.83■■■□□ 2.05
CR381653.1-201ENST00000622961 CCDC88BA6NC98 1476 aa27.81■■■□□ 2.04
CR381653.1-201ENST00000622961 TOPBP1Q92547 1522 aa27.54■■■□□ 2
CR381653.1-201ENST00000622961 DNMBPQ6XZF7 1577 aa27.5■■□□□ 1.99
CR381653.1-201ENST00000622961 IFT140Q96RY7 1462 aa27.46■■□□□ 1.99
CR381653.1-201ENST00000622961 ZNF608Q9ULD9 1512 aaPredicted RBP27.43■■□□□ 1.98
CR381653.1-201ENST00000622961 EIF4G3O43432 1585 aaKnown RBP27.42■■□□□ 1.98
CR381653.1-201ENST00000622961 ABCC8Q09428 1581 aa27.42■■□□□ 1.98
CR381653.1-201ENST00000622961 TARBP1Q13395 1621 aaKnown RBP27.38■■□□□ 1.97
CR381653.1-201ENST00000622961 POLA1P09884 1462 aaPredicted RBP27.26■■□□□ 1.95
CR381653.1-201ENST00000622961 OSCARQ8IYS5 282 aa27.23■■□□□ 1.95
CR381653.1-201ENST00000622961 CHD1O14646 1710 aa27.23■■□□□ 1.95
CR381653.1-201ENST00000622961 RIMBP3CA6NJZ7 1639 aa27.16■■□□□ 1.94
CR381653.1-201ENST00000622961 RIMBP3BA6NNM3 1639 aa27.16■■□□□ 1.94
CR381653.1-201ENST00000622961 RIMBP3Q9UFD9 1639 aa27.16■■□□□ 1.94
CR381653.1-201ENST00000622961 TRIM41Q8WV44 630 aa27.16■■□□□ 1.94
CR381653.1-201ENST00000622961 CUX1P39880 1505 aa27.15■■□□□ 1.94
CR381653.1-201ENST00000622961 AQRO60306 1485 aaKnown RBP eCLIP27.13■■□□□ 1.93
CR381653.1-201ENST00000622961 WDR97A6NE52 1622 aa27.12■■□□□ 1.93
CR381653.1-201ENST00000622961 FGD5Q6ZNL6 1462 aa27.12■■□□□ 1.93
CR381653.1-201ENST00000622961 RAD54L2Q9Y4B4 1467 aa27.12■■□□□ 1.93
CR381653.1-201ENST00000622961 ARHGEF11O15085 1522 aa27.03■■□□□ 1.92
CR381653.1-201ENST00000622961 SOGA1O94964 1423 aa27.02■■□□□ 1.92
CR381653.1-201ENST00000622961 PBRM1Q86U86 1689 aa26.97■■□□□ 1.91
CR381653.1-201ENST00000622961 TDRD9Q8NDG6 1382 aaKnown RBP26.95■■□□□ 1.9
CR381653.1-201ENST00000622961 SNAPC4Q5SXM2 1469 aa26.94■■□□□ 1.9
CR381653.1-201ENST00000622961 SUPT5HO00267 1087 aaKnown RBP26.92■■□□□ 1.9
CR381653.1-201ENST00000622961 ABCA5Q8WWZ7 1642 aa26.89■■□□□ 1.9
CR381653.1-201ENST00000622961 MAGI1Q96QZ7 1491 aaPredicted RBP26.87■■□□□ 1.89
CR381653.1-201ENST00000622961 CLASP1Q7Z460 1538 aa26.85■■□□□ 1.89
CR381653.1-201ENST00000622961 BIVM-ERCC5R4GMW8 1640 aa26.85■■□□□ 1.89
CR381653.1-201ENST00000622961 GRIN2BQ13224 1484 aa26.85■■□□□ 1.89
CR381653.1-201ENST00000622961 ABCA10Q8WWZ4 1543 aa26.81■■□□□ 1.88
CR381653.1-201ENST00000622961 SYNJ1O43426 1573 aa26.79■■□□□ 1.88
CR381653.1-201ENST00000622961 ARAP1Q96P48 1450 aa26.78■■□□□ 1.88
CR381653.1-201ENST00000622961 TOP2BQ02880 1626 aa26.78■■□□□ 1.88
CR381653.1-201ENST00000622961 SYNJ2O15056 1496 aa26.76■■□□□ 1.87
CR381653.1-201ENST00000622961 GAPVD1Q14C86 1478 aa26.76■■□□□ 1.87
CR381653.1-201ENST00000622961 FBLN2P98095 1184 aa26.76■■□□□ 1.87
CR381653.1-201ENST00000622961 ADAMTS12P58397 1594 aa26.66■■□□□ 1.86
CR381653.1-201ENST00000622961 WRNQ14191 1432 aaPredicted RBP eCLIP26.65■■□□□ 1.86
CR381653.1-201ENST00000622961 CHMP7Q8WUX9 453 aaPredicted RBP26.61■■□□□ 1.85
CR381653.1-201ENST00000622961 CYB5RLQ6IPT4 315 aa26.58■■□□□ 1.85
CR381653.1-201ENST00000622961 GRIN2AQ12879 1464 aa26.55■■□□□ 1.84
CR381653.1-201ENST00000622961 CEP170Q5SW79 1584 aa26.52■■□□□ 1.84
CR381653.1-201ENST00000622961 ERICH3Q5RHP9 1530 aa26.49■■□□□ 1.83
CR381653.1-201ENST00000622961 NUP160Q12769 1436 aa26.45■■□□□ 1.82
CR381653.1-201ENST00000622961 SHROOM2Q13796 1616 aa26.43■■□□□ 1.82
CR381653.1-201ENST00000622961 ERCC6L2Q5T890 1561 aa26.42■■□□□ 1.82
CR381653.1-201ENST00000622961 FHAD1B1AJZ9 1412 aa26.41■■□□□ 1.82
CR381653.1-201ENST00000622961 RUSC2Q8N2Y8 1516 aa26.3■■□□□ 1.8
CR381653.1-201ENST00000622961 CUL7Q14999 1698 aa26.22■■□□□ 1.79
CR381653.1-201ENST00000622961 TRHP20396 242 aaPredicted RBP26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms