Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RARAP10276 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RARAP10276 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.17■□□□□ 0.18
RARAP10276 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RARAP10276 FAM8A3P-201ENST00000427218 844 ntBASIC16.17■□□□□ 0.18
RARAP10276 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.17■□□□□ 0.18
RARAP10276 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RARAP10276 AC092183.1-201ENST00000469884 875 ntBASIC16.17■□□□□ 0.18
RARAP10276 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.17■□□□□ 0.18
RARAP10276 AC092337.1-201ENST00000568699 1129 ntBASIC16.17■□□□□ 0.18
RARAP10276 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
RARAP10276 AC025181.2-201ENST00000606994 802 ntBASIC16.17■□□□□ 0.18
RARAP10276 AC008738.7-201ENST00000609744 511 ntBASIC16.17■□□□□ 0.18
RARAP10276 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RARAP10276 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.17■□□□□ 0.18
RARAP10276 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RARAP10276 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RARAP10276 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RARAP10276 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RARAP10276 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RARAP10276 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RARAP10276 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RARAP10276 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RARAP10276 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RARAP10276 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.17■□□□□ 0.18
RARAP10276 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RARAP10276 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.17■□□□□ 0.18
RARAP10276 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.17■□□□□ 0.18
RARAP10276 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
RARAP10276 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RARAP10276 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
RARAP10276 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RARAP10276 BTBD7P1-201ENST00000447253 1453 ntBASIC16.16■□□□□ 0.18
RARAP10276 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.16■□□□□ 0.18
RARAP10276 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.16■□□□□ 0.18
RARAP10276 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RARAP10276 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RARAP10276 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RARAP10276 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RARAP10276 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RARAP10276 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
RARAP10276 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RARAP10276 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RARAP10276 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RARAP10276 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RARAP10276 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RARAP10276 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RARAP10276 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.16■□□□□ 0.18
RARAP10276 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.16■□□□□ 0.18
RARAP10276 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.16■□□□□ 0.18
RARAP10276 SPDYE18-201ENST00000510091 1050 ntBASIC16.16■□□□□ 0.18
RARAP10276 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.16■□□□□ 0.18
RARAP10276 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.16■□□□□ 0.18
RARAP10276 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.16■□□□□ 0.18
RARAP10276 TIMM17BP1-201ENST00000545713 516 ntBASIC16.16■□□□□ 0.18
RARAP10276 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.16■□□□□ 0.18
RARAP10276 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RARAP10276 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.16■□□□□ 0.18
RARAP10276 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RARAP10276 AC004840.1-201ENST00000636359 365 ntBASIC16.16■□□□□ 0.18
RARAP10276 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RARAP10276 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
RARAP10276 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
RARAP10276 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RARAP10276 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RARAP10276 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RARAP10276 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RARAP10276 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RARAP10276 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RARAP10276 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RARAP10276 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RARAP10276 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RARAP10276 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RARAP10276 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.16■□□□□ 0.18
RARAP10276 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.16■□□□□ 0.18
RARAP10276 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.16■□□□□ 0.18
RARAP10276 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RARAP10276 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.16■□□□□ 0.18
RARAP10276 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RARAP10276 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RARAP10276 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RARAP10276 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RARAP10276 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RARAP10276 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RARAP10276 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.15■□□□□ 0.18
RARAP10276 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RARAP10276 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
RARAP10276 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RARAP10276 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.15■□□□□ 0.18
RARAP10276 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RARAP10276 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.15■□□□□ 0.18
RARAP10276 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RARAP10276 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RARAP10276 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RARAP10276 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RARAP10276 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.15■□□□□ 0.18
RARAP10276 GHSR-202ENST00000427970 912 ntBASIC16.15■□□□□ 0.18
RARAP10276 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.15■□□□□ 0.18
RARAP10276 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RARAP10276 AL589987.1-201ENST00000453380 819 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms