Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GPC4O75487 AC138969.2-201ENST00000532739 9932 ntBASIC15.51■□□□□ 0.07
GPC4O75487 AC112693.3-201ENST00000624819 1983 ntBASIC15.51■□□□□ 0.07
GPC4O75487 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
GPC4O75487 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GPC4O75487 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GPC4O75487 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GPC4O75487 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
GPC4O75487 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.5■□□□□ 0.07
GPC4O75487 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
GPC4O75487 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.5■□□□□ 0.07
GPC4O75487 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GPC4O75487 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GPC4O75487 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.5■□□□□ 0.07
GPC4O75487 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.5■□□□□ 0.07
GPC4O75487 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GPC4O75487 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.5■□□□□ 0.07
GPC4O75487 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.5■□□□□ 0.07
GPC4O75487 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GPC4O75487 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.5■□□□□ 0.07
GPC4O75487 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.5■□□□□ 0.07
GPC4O75487 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GPC4O75487 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.5■□□□□ 0.07
GPC4O75487 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
GPC4O75487 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GPC4O75487 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.5■□□□□ 0.07
GPC4O75487 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
GPC4O75487 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.5■□□□□ 0.07
GPC4O75487 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.5■□□□□ 0.07
GPC4O75487 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.5■□□□□ 0.07
GPC4O75487 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.5■□□□□ 0.07
GPC4O75487 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.5■□□□□ 0.07
GPC4O75487 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.5■□□□□ 0.07
GPC4O75487 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GPC4O75487 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.5■□□□□ 0.07
GPC4O75487 AC044860.1-202ENST00000559481 777 ntBASIC15.5■□□□□ 0.07
GPC4O75487 AC009407.1-201ENST00000568958 598 ntBASIC15.5■□□□□ 0.07
GPC4O75487 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.5■□□□□ 0.07
GPC4O75487 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
GPC4O75487 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GPC4O75487 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GPC4O75487 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GPC4O75487 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
GPC4O75487 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.5■□□□□ 0.07
GPC4O75487 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
GPC4O75487 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.5■□□□□ 0.07
GPC4O75487 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
GPC4O75487 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GPC4O75487 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
GPC4O75487 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GPC4O75487 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
GPC4O75487 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.49■□□□□ 0.07
GPC4O75487 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.49■□□□□ 0.07
GPC4O75487 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.49■□□□□ 0.07
GPC4O75487 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.49■□□□□ 0.07
GPC4O75487 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.49■□□□□ 0.07
GPC4O75487 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
GPC4O75487 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
GPC4O75487 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.49■□□□□ 0.07
GPC4O75487 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.49■□□□□ 0.07
GPC4O75487 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.49■□□□□ 0.07
GPC4O75487 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.49■□□□□ 0.07
GPC4O75487 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.49■□□□□ 0.07
GPC4O75487 AC074044.1-201ENST00000609673 707 ntBASIC15.49■□□□□ 0.07
GPC4O75487 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.49■□□□□ 0.07
GPC4O75487 AL109936.8-201ENST00000641772 604 ntBASIC15.49■□□□□ 0.07
GPC4O75487 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.49■□□□□ 0.07
GPC4O75487 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
GPC4O75487 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
GPC4O75487 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
GPC4O75487 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.49■□□□□ 0.07
GPC4O75487 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 AC106881.1-201ENST00000605849 3329 ntBASIC15.49■□□□□ 0.07
GPC4O75487 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms