Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAPH1Q70E73 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAPH1Q70E73 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
RAPH1Q70E73 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.56■□□□□ 0.08
RAPH1Q70E73 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.56■□□□□ 0.08
RAPH1Q70E73 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
RAPH1Q70E73 RPL5P21-201ENST00000404620 815 ntBASIC15.56■□□□□ 0.08
RAPH1Q70E73 AL627223.1-201ENST00000416693 442 ntBASIC15.56■□□□□ 0.08
RAPH1Q70E73 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.56■□□□□ 0.08
RAPH1Q70E73 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
RAPH1Q70E73 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAPH1Q70E73 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.56■□□□□ 0.08
RAPH1Q70E73 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.56■□□□□ 0.08
RAPH1Q70E73 BANF1P1-201ENST00000553684 263 ntBASIC15.56■□□□□ 0.08
RAPH1Q70E73 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.56■□□□□ 0.08
RAPH1Q70E73 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.56■□□□□ 0.08
RAPH1Q70E73 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.56■□□□□ 0.08
RAPH1Q70E73 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.56■□□□□ 0.08
RAPH1Q70E73 MIR4469-201ENST00000583919 79 ntBASIC15.56■□□□□ 0.08
RAPH1Q70E73 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.56■□□□□ 0.08
RAPH1Q70E73 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.56■□□□□ 0.08
RAPH1Q70E73 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAPH1Q70E73 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAPH1Q70E73 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAPH1Q70E73 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.56■□□□□ 0.08
RAPH1Q70E73 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAPH1Q70E73 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.56■□□□□ 0.08
RAPH1Q70E73 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.56■□□□□ 0.08
RAPH1Q70E73 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.56■□□□□ 0.08
RAPH1Q70E73 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAPH1Q70E73 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RAPH1Q70E73 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAPH1Q70E73 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAPH1Q70E73 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAPH1Q70E73 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
RAPH1Q70E73 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAPH1Q70E73 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.56■□□□□ 0.08
RAPH1Q70E73 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAPH1Q70E73 CICP11-201ENST00000434745 2827 ntBASIC15.56■□□□□ 0.08
RAPH1Q70E73 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
RAPH1Q70E73 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAPH1Q70E73 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAPH1Q70E73 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAPH1Q70E73 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.56■□□□□ 0.08
RAPH1Q70E73 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAPH1Q70E73 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAPH1Q70E73 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAPH1Q70E73 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAPH1Q70E73 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.55■□□□□ 0.08
RAPH1Q70E73 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAPH1Q70E73 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAPH1Q70E73 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAPH1Q70E73 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RAPH1Q70E73 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAPH1Q70E73 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAPH1Q70E73 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAPH1Q70E73 AC084364.1-201ENST00000551967 1556 ntBASIC15.55■□□□□ 0.08
RAPH1Q70E73 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RAPH1Q70E73 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAPH1Q70E73 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAPH1Q70E73 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAPH1Q70E73 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAPH1Q70E73 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAPH1Q70E73 AC004461.1-201ENST00000412461 403 ntBASIC15.55■□□□□ 0.08
RAPH1Q70E73 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.55■□□□□ 0.08
RAPH1Q70E73 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.55■□□□□ 0.08
RAPH1Q70E73 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.55■□□□□ 0.08
RAPH1Q70E73 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAPH1Q70E73 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAPH1Q70E73 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.55■□□□□ 0.08
RAPH1Q70E73 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.55■□□□□ 0.08
RAPH1Q70E73 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.55■□□□□ 0.08
RAPH1Q70E73 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.55■□□□□ 0.08
RAPH1Q70E73 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RAPH1Q70E73 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAPH1Q70E73 AL513210.1-201ENST00000629608 234 ntBASIC15.55■□□□□ 0.08
RAPH1Q70E73 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RAPH1Q70E73 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAPH1Q70E73 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAPH1Q70E73 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RAPH1Q70E73 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.55■□□□□ 0.08
RAPH1Q70E73 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RAPH1Q70E73 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RAPH1Q70E73 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAPH1Q70E73 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAPH1Q70E73 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.55■□□□□ 0.08
RAPH1Q70E73 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAPH1Q70E73 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAPH1Q70E73 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.55■□□□□ 0.08
RAPH1Q70E73 ZBED1P1-201ENST00000502364 1930 ntBASIC15.55■□□□□ 0.08
RAPH1Q70E73 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAPH1Q70E73 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAPH1Q70E73 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAPH1Q70E73 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAPH1Q70E73 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.54■□□□□ 0.08
RAPH1Q70E73 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
RAPH1Q70E73 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAPH1Q70E73 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RAPH1Q70E73 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
RAPH1Q70E73 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms