RNA–Protein interactions for RNA: ENST00000325083.12

PCM1-201, Transcript of pericentriolar material 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCM1, Length 6,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-201ENST00000325083 DCAF8L2P0C7V8 631 aa24.16■■□□□ 1.46
PCM1-201ENST00000325083 EHMT2Q96KQ7 1210 aa22.86■■□□□ 1.25
PCM1-201ENST00000325083 PELP1Q8IZL8 1130 aaKnown RBP22.79■■□□□ 1.24
PCM1-201ENST00000325083 SUPT5HO00267 1087 aaKnown RBP22.76■■□□□ 1.23
PCM1-201ENST00000325083 SHROOM4Q9ULL8 1493 aa22.22■■□□□ 1.15
PCM1-201ENST00000325083 ERICH6Q7L0X2 663 aa22.22■■□□□ 1.15
PCM1-201ENST00000325083 APLP2Q06481 763 aa22.09■■□□□ 1.13
PCM1-201ENST00000325083 TTBK1Q5TCY1 1321 aaPredicted RBP22.09■■□□□ 1.13
PCM1-201ENST00000325083 CCER1Q8TC90 406 aaPredicted RBP21.8■■□□□ 1.08
PCM1-201ENST00000325083 FAM9AQ8IZU1 332 aaPredicted RBP21.72■■□□□ 1.07
PCM1-201ENST00000325083 RANGAP1P46060 587 aaPredicted RBP21.69■■□□□ 1.06
PCM1-201ENST00000325083 PCGF6Q9BYE7 350 aa21.67■■□□□ 1.06
PCM1-201ENST00000325083 ATP1B4Q9UN42 357 aaPredicted RBP21.56■■□□□ 1.04
PCM1-201ENST00000325083 CENPBP07199 599 aaPredicted RBP21.55■■□□□ 1.04
PCM1-201ENST00000325083 MYT1Q01538 1121 aa21.52■■□□□ 1.04
PCM1-201ENST00000325083 YTHDC1Q96MU7 727 aaKnown RBP21.41■■□□□ 1.02
PCM1-201ENST00000325083 NEFLP07196 543 aa21.34■■□□□ 1.01
PCM1-201ENST00000325083 ZEB1P37275 1124 aaPredicted RBP21.08■□□□□ 0.97
PCM1-201ENST00000325083 DAXXQ9UER7 740 aaPredicted RBP21.08■□□□□ 0.96
PCM1-201ENST00000325083 POLR3GLQ9BT43 218 aa20.95■□□□□ 0.94
PCM1-201ENST00000325083 UBTFP17480 764 aaKnown RBP20.95■□□□□ 0.94
PCM1-201ENST00000325083 NISCHQ9Y2I1 1504 aa20.9■□□□□ 0.94
PCM1-201ENST00000325083 PPARGC1BQ86YN6 1023 aaKnown RBP20.9■□□□□ 0.94
PCM1-201ENST00000325083 TRIM41Q8WV44 630 aa20.89■□□□□ 0.93
PCM1-201ENST00000325083 MYT1LQ9UL68 1186 aa20.86■□□□□ 0.93
PCM1-201ENST00000325083 CNGB1Q14028 1251 aaPredicted RBP20.85■□□□□ 0.93
PCM1-201ENST00000325083 CHIC1Q5VXU3 224 aa20.75■□□□□ 0.91
PCM1-201ENST00000325083 SLC4A1APQ9BWU0 796 aaKnown RBP20.67■□□□□ 0.9
PCM1-201ENST00000325083 ITGAEP38570 1179 aa20.65■□□□□ 0.9
PCM1-201ENST00000325083 ZNF316A6NFI3 1004 aaPredicted RBP20.58■□□□□ 0.88
PCM1-201ENST00000325083 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.56■□□□□ 0.88
PCM1-201ENST00000325083 HNRNPUL2Q1KMD3 747 aaKnown RBP20.56■□□□□ 0.88
PCM1-201ENST00000325083 CLSPNQ9HAW4 1339 aa20.49■□□□□ 0.87
PCM1-201ENST00000325083 RTL5Q5HYW3 569 aaPredicted RBP20.43■□□□□ 0.86
PCM1-201ENST00000325083 TRIM26Q12899 539 aaPredicted RBP20.25■□□□□ 0.83
PCM1-201ENST00000325083 HRCP23327 699 aa20.22■□□□□ 0.83
PCM1-201ENST00000325083 BCL11AQ9H165 835 aa20.19■□□□□ 0.82
PCM1-201ENST00000325083 SLC24A1O60721 1099 aa20.1■□□□□ 0.81
PCM1-201ENST00000325083 BCANQ96GW7 911 aa20.08■□□□□ 0.81
PCM1-201ENST00000325083 ZBTB47Q9UFB7 747 aaPredicted RBP20.02■□□□□ 0.79
PCM1-201ENST00000325083 FAM50AQ14320 339 aaKnown RBP19.92■□□□□ 0.78
PCM1-201ENST00000325083 LOC105371045A0A1W2PR82 267 aa19.92■□□□□ 0.78
PCM1-201ENST00000325083 DIEXFQ68CQ4 756 aaKnown RBP19.92■□□□□ 0.78
PCM1-201ENST00000325083 TRIM52Q96A61 297 aa19.92■□□□□ 0.78
PCM1-201ENST00000325083 NEUROD1Q13562 356 aa19.9■□□□□ 0.78
PCM1-201ENST00000325083 CANXP27824 592 aaKnown RBP19.85■□□□□ 0.77
PCM1-201ENST00000325083 ZNF326Q5BKZ1 582 aaKnown RBP19.83■□□□□ 0.77
PCM1-201ENST00000325083 CDK11AQ9UQ88 783 aaPredicted RBP19.83■□□□□ 0.76
PCM1-201ENST00000325083 NPM2Q86SE8 214 aaKnown RBP19.68■□□□□ 0.74
PCM1-201ENST00000325083 ANP32CO43423 234 aa19.68■□□□□ 0.74
PCM1-201ENST00000325083 GTF3C3Q9Y5Q9 886 aa19.68■□□□□ 0.74
PCM1-201ENST00000325083 EIF5BO60841 1220 aaKnown RBP19.63■□□□□ 0.73
PCM1-201ENST00000325083 NEFMP07197 916 aa19.58■□□□□ 0.72
PCM1-201ENST00000325083 ANP32AP39687 249 aaKnown RBP19.54■□□□□ 0.72
PCM1-201ENST00000325083 ANP32BQ92688 251 aaKnown RBP19.5■□□□□ 0.71
PCM1-201ENST00000325083 HSP90AA1P07900 732 aaKnown RBP19.46■□□□□ 0.71
PCM1-201ENST00000325083 PLPPR3Q6T4P5 718 aa19.41■□□□□ 0.7
PCM1-201ENST00000325083 FBLN2P98095 1184 aa19.41■□□□□ 0.7
PCM1-201ENST00000325083 ARXQ96QS3 562 aa19.39■□□□□ 0.69
PCM1-201ENST00000325083 ARID3CA6NKF2 412 aa19.36■□□□□ 0.69
PCM1-201ENST00000325083 NBR1Q14596 966 aa19.25■□□□□ 0.67
PCM1-201ENST00000325083 SALL2Q9Y467 1007 aaPredicted RBP19.22■□□□□ 0.67
PCM1-201ENST00000325083 GLIPR1L2Q4G1C9 344 aa19.22■□□□□ 0.67
PCM1-201ENST00000325083 UPF2Q9HAU5 1272 aaKnown RBP19.22■□□□□ 0.67
PCM1-201ENST00000325083 ZNF777Q9ULD5 760 aaPredicted RBP19.2■□□□□ 0.66
PCM1-201ENST00000325083 FKBP8Q14318 412 aa19.2■□□□□ 0.66
PCM1-201ENST00000325083 P3H3Q8IVL6 736 aa19.19■□□□□ 0.66
PCM1-201ENST00000325083 CHGAP10645 457 aaKnown RBP19.18■□□□□ 0.66
PCM1-201ENST00000325083 STAG3Q9UJ98 1225 aa19.15■□□□□ 0.66
PCM1-201ENST00000325083 CDK11BP21127 795 aaKnown RBP19.15■□□□□ 0.66
PCM1-201ENST00000325083 ESF1Q9H501 851 aaKnown RBP19.12■□□□□ 0.65
PCM1-201ENST00000325083 SCAF1Q9H7N4 1312 aaKnown RBP19.11■□□□□ 0.65
PCM1-201ENST00000325083 A0A0G2JS52 829 aa19.11■□□□□ 0.65
PCM1-201ENST00000325083 FAM9BQ8IZU0 186 aa19.09■□□□□ 0.65
PCM1-201ENST00000325083 ACIN1Q9UKV3 1341 aaKnown RBP19.08■□□□□ 0.64
PCM1-201ENST00000325083 PABPN1Q86U42 306 aaKnown RBP eCLIP19.06■□□□□ 0.64
PCM1-201ENST00000325083 TULP1O00294 542 aaPredicted RBP19.02■□□□□ 0.64
PCM1-201ENST00000325083 PLEKHG5O94827 1062 aa19.02■□□□□ 0.63
PCM1-201ENST00000325083 HNRNPUQ00839 825 aaKnown RBP eCLIP19.01■□□□□ 0.63
PCM1-201ENST00000325083 ZBTB7CA1YPR0 619 aa18.98■□□□□ 0.63
PCM1-201ENST00000325083 TPRNQ4KMQ1 711 aa18.94■□□□□ 0.62
PCM1-201ENST00000325083 SENP3Q9H4L4 574 aaPredicted RBP18.94■□□□□ 0.62
PCM1-201ENST00000325083 CCDC136Q96JN2 1154 aa18.93■□□□□ 0.62
PCM1-201ENST00000325083 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.91■□□□□ 0.62
PCM1-201ENST00000325083 IRX6P78412 446 aaPredicted RBP18.89■□□□□ 0.61
PCM1-201ENST00000325083 WDR43Q15061 677 aaKnown RBP eCLIP18.88■□□□□ 0.61
PCM1-201ENST00000325083 DDX10Q13206 875 aaKnown RBP18.87■□□□□ 0.61
PCM1-201ENST00000325083 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.87■□□□□ 0.611e-7■■□□□ 13.6
PCM1-201ENST00000325083 TONSLQ96HA7 1378 aa18.85■□□□□ 0.61
PCM1-201ENST00000325083 MYH16Q9H6N6 1097 aa18.85■□□□□ 0.61
PCM1-201ENST00000325083 TMC1Q8TDI8 760 aa18.85■□□□□ 0.61
PCM1-201ENST00000325083 NCLP19338 710 aaKnown RBP18.81■□□□□ 0.6
PCM1-201ENST00000325083 TRIM44Q96DX7 344 aaPredicted RBP18.8■□□□□ 0.6
PCM1-201ENST00000325083 C14orf37Q86TY3 774 aa18.79■□□□□ 0.6
PCM1-201ENST00000325083 TAOK2Q9UL54 1235 aa18.78■□□□□ 0.6
PCM1-201ENST00000325083 KDM2AQ9Y2K7 1162 aa18.77■□□□□ 0.6
PCM1-201ENST00000325083 PTMAP06454 111 aaKnown RBP18.72■□□□□ 0.59
PCM1-201ENST00000325083 DNTTIP2Q5QJE6 756 aaKnown RBP18.72■□□□□ 0.59
PCM1-201ENST00000325083 CHIC2Q9UKJ5 165 aa18.7■□□□□ 0.58
PCM1-201ENST00000325083 ABCC9O60706 1549 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms