Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHC3Q92529 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHC3Q92529 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.4■□□□□ 0.22
SHC3Q92529 HLA-K-203ENST00000430151 1046 ntBASIC16.4■□□□□ 0.22
SHC3Q92529 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.4■□□□□ 0.22
SHC3Q92529 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.4■□□□□ 0.22
SHC3Q92529 BCRP1-201ENST00000444246 691 ntBASIC16.4■□□□□ 0.22
SHC3Q92529 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHC3Q92529 TSPY16P-201ENST00000449843 468 ntBASIC16.4■□□□□ 0.22
SHC3Q92529 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.4■□□□□ 0.22
SHC3Q92529 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.4■□□□□ 0.22
SHC3Q92529 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHC3Q92529 AC093813.1-201ENST00000605066 256 ntBASIC16.4■□□□□ 0.22
SHC3Q92529 AC093726.1-201ENST00000608064 963 ntBASIC16.4■□□□□ 0.22
SHC3Q92529 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.4■□□□□ 0.22
SHC3Q92529 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.4■□□□□ 0.22
SHC3Q92529 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SHC3Q92529 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.4■□□□□ 0.22
SHC3Q92529 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.4■□□□□ 0.22
SHC3Q92529 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHC3Q92529 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHC3Q92529 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.4■□□□□ 0.22
SHC3Q92529 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHC3Q92529 AL157414.3-201ENST00000624276 1954 ntBASIC16.4■□□□□ 0.22
SHC3Q92529 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.4■□□□□ 0.22
SHC3Q92529 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.4■□□□□ 0.22
SHC3Q92529 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHC3Q92529 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHC3Q92529 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHC3Q92529 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.4■□□□□ 0.22
SHC3Q92529 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SHC3Q92529 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SHC3Q92529 INTS4P2-202ENST00000614726 2019 ntBASIC16.4■□□□□ 0.22
SHC3Q92529 AL390755.1-201ENST00000623716 2027 ntBASIC16.4■□□□□ 0.22
SHC3Q92529 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHC3Q92529 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHC3Q92529 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.4■□□□□ 0.22
SHC3Q92529 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
SHC3Q92529 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.39■□□□□ 0.21
SHC3Q92529 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.39■□□□□ 0.21
SHC3Q92529 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SHC3Q92529 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SHC3Q92529 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.39■□□□□ 0.21
SHC3Q92529 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.39■□□□□ 0.21
SHC3Q92529 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHC3Q92529 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHC3Q92529 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHC3Q92529 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHC3Q92529 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.39■□□□□ 0.21
SHC3Q92529 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHC3Q92529 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.39■□□□□ 0.21
SHC3Q92529 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHC3Q92529 AL645937.2-201ENST00000396808 931 ntBASIC16.39■□□□□ 0.21
SHC3Q92529 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHC3Q92529 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.39■□□□□ 0.21
SHC3Q92529 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHC3Q92529 FAM207CP-201ENST00000443486 507 ntBASIC16.39■□□□□ 0.21
SHC3Q92529 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHC3Q92529 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.39■□□□□ 0.21
SHC3Q92529 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.39■□□□□ 0.21
SHC3Q92529 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.39■□□□□ 0.21
SHC3Q92529 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.39■□□□□ 0.21
SHC3Q92529 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHC3Q92529 SPCS2P1-201ENST00000561636 679 ntBASIC16.39■□□□□ 0.21
SHC3Q92529 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.39■□□□□ 0.21
SHC3Q92529 AC120045.2-201ENST00000567334 178 ntBASIC16.39■□□□□ 0.21
SHC3Q92529 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.39■□□□□ 0.21
SHC3Q92529 AL096865.1-201ENST00000606796 927 ntBASIC16.39■□□□□ 0.21
SHC3Q92529 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHC3Q92529 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SHC3Q92529 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.39■□□□□ 0.21
SHC3Q92529 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.39■□□□□ 0.21
SHC3Q92529 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHC3Q92529 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.39■□□□□ 0.21
SHC3Q92529 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.39■□□□□ 0.21
SHC3Q92529 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.39■□□□□ 0.21
SHC3Q92529 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SHC3Q92529 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.39■□□□□ 0.21
SHC3Q92529 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
SHC3Q92529 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHC3Q92529 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.39■□□□□ 0.21
SHC3Q92529 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHC3Q92529 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHC3Q92529 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHC3Q92529 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.39■□□□□ 0.21
SHC3Q92529 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHC3Q92529 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.38■□□□□ 0.21
SHC3Q92529 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SHC3Q92529 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHC3Q92529 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.38■□□□□ 0.21
SHC3Q92529 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SHC3Q92529 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SHC3Q92529 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SHC3Q92529 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHC3Q92529 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHC3Q92529 AL158070.2-201ENST00000623713 1621 ntBASIC16.38■□□□□ 0.21
SHC3Q92529 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHC3Q92529 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.38■□□□□ 0.21
SHC3Q92529 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SHC3Q92529 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms