Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 AC015922.1-201ENST00000421102 1152 ntBASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 TREML5P-201ENST00000421694 576 ntBASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 AL512638.1-201ENST00000457493 794 ntBASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 AF228730.6-201ENST00000641497 218 ntBASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 AC084121.3-201ENST00000641716 218 ntBASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 AC105233.6-201ENST00000642093 218 ntBASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 TCAF1P1-201ENST00000414990 2232 ntBASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 SPCS2P4-201ENST00000436160 681 ntBASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 PPT1-213ENST00000641319 2388 ntBASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXR1Q6PIV2 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 INTS4P1-203ENST00000641008 3683 ntBASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 HMGA1P7-201ENST00000406908 502 ntBASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms