Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RBM48Q5RL73 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RBM48Q5RL73 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RBM48Q5RL73 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.12□□□□□ -0.15
RBM48Q5RL73 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.12□□□□□ -0.15
RBM48Q5RL73 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.12□□□□□ -0.15
RBM48Q5RL73 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
RBM48Q5RL73 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RBM48Q5RL73 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RBM48Q5RL73 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RBM48Q5RL73 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RBM48Q5RL73 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RBM48Q5RL73 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RBM48Q5RL73 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.12□□□□□ -0.15
RBM48Q5RL73 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RBM48Q5RL73 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RBM48Q5RL73 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RBM48Q5RL73 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RBM48Q5RL73 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
RBM48Q5RL73 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RBM48Q5RL73 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RBM48Q5RL73 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RBM48Q5RL73 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
RBM48Q5RL73 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RBM48Q5RL73 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RBM48Q5RL73 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RBM48Q5RL73 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RBM48Q5RL73 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RBM48Q5RL73 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RBM48Q5RL73 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RBM48Q5RL73 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RBM48Q5RL73 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RBM48Q5RL73 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RBM48Q5RL73 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 EEF1DP4-201ENST00000446006 880 ntBASIC14.11□□□□□ -0.15
RBM48Q5RL73 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RBM48Q5RL73 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RBM48Q5RL73 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RBM48Q5RL73 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RBM48Q5RL73 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RBM48Q5RL73 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RBM48Q5RL73 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RBM48Q5RL73 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RBM48Q5RL73 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RBM48Q5RL73 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.11□□□□□ -0.15
RBM48Q5RL73 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RBM48Q5RL73 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.1□□□□□ -0.15
RBM48Q5RL73 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RBM48Q5RL73 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RBM48Q5RL73 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
RBM48Q5RL73 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
RBM48Q5RL73 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RBM48Q5RL73 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
RBM48Q5RL73 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RBM48Q5RL73 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RBM48Q5RL73 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RBM48Q5RL73 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RBM48Q5RL73 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RBM48Q5RL73 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RBM48Q5RL73 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RBM48Q5RL73 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RBM48Q5RL73 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
RBM48Q5RL73 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RBM48Q5RL73 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RBM48Q5RL73 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RBM48Q5RL73 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RBM48Q5RL73 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.1□□□□□ -0.15
RBM48Q5RL73 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.1□□□□□ -0.15
RBM48Q5RL73 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RBM48Q5RL73 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.1□□□□□ -0.15
RBM48Q5RL73 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RBM48Q5RL73 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms