Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.58□□□□□ -0.24
RAB3BP20337 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC13.58□□□□□ -0.24
RAB3BP20337 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.58□□□□□ -0.24
RAB3BP20337 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.58□□□□□ -0.24
RAB3BP20337 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.58□□□□□ -0.24
RAB3BP20337 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.58□□□□□ -0.24
RAB3BP20337 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
RAB3BP20337 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB3BP20337 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.58□□□□□ -0.24
RAB3BP20337 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAB3BP20337 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAB3BP20337 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAB3BP20337 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
RAB3BP20337 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RAB3BP20337 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB3BP20337 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
RAB3BP20337 AP000845.1-201ENST00000581677 2131 ntBASIC13.58□□□□□ -0.24
RAB3BP20337 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.58□□□□□ -0.24
RAB3BP20337 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB3BP20337 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAB3BP20337 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.58□□□□□ -0.24
RAB3BP20337 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB3BP20337 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB3BP20337 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB3BP20337 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAB3BP20337 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB3BP20337 AL607033.1-201ENST00000623900 1599 ntBASIC13.58□□□□□ -0.24
RAB3BP20337 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB3BP20337 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 AC092135.3-201ENST00000624151 1846 ntBASIC13.57□□□□□ -0.24
RAB3BP20337 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
RAB3BP20337 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.57□□□□□ -0.24
RAB3BP20337 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.57□□□□□ -0.24
RAB3BP20337 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RAB3BP20337 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
RAB3BP20337 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.57□□□□□ -0.24
RAB3BP20337 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
RAB3BP20337 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.57□□□□□ -0.24
RAB3BP20337 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.57□□□□□ -0.24
RAB3BP20337 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.57□□□□□ -0.24
RAB3BP20337 GHSR-202ENST00000427970 912 ntBASIC13.57□□□□□ -0.24
RAB3BP20337 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.57□□□□□ -0.24
RAB3BP20337 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.57□□□□□ -0.24
RAB3BP20337 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.57□□□□□ -0.24
RAB3BP20337 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.57□□□□□ -0.24
RAB3BP20337 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.57□□□□□ -0.24
RAB3BP20337 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
RAB3BP20337 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
RAB3BP20337 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
RAB3BP20337 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
RAB3BP20337 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.57□□□□□ -0.24
RAB3BP20337 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.57□□□□□ -0.24
RAB3BP20337 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.57□□□□□ -0.24
RAB3BP20337 AL138918.1-201ENST00000568306 659 ntBASIC13.57□□□□□ -0.24
RAB3BP20337 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.57□□□□□ -0.24
RAB3BP20337 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
RAB3BP20337 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.57□□□□□ -0.24
RAB3BP20337 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RAB3BP20337 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RAB3BP20337 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
RAB3BP20337 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.57□□□□□ -0.24
RAB3BP20337 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.57□□□□□ -0.24
RAB3BP20337 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.57□□□□□ -0.24
RAB3BP20337 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.57□□□□□ -0.24
RAB3BP20337 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
RAB3BP20337 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.57□□□□□ -0.24
RAB3BP20337 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB3BP20337 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms