Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
PFDN1O60925 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.75□□□□□ -0.21
PFDN1O60925 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
PFDN1O60925 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.75□□□□□ -0.21
PFDN1O60925 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PFDN1O60925 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
PFDN1O60925 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.74□□□□□ -0.21
PFDN1O60925 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC13.74□□□□□ -0.21
PFDN1O60925 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PFDN1O60925 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PFDN1O60925 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
PFDN1O60925 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PFDN1O60925 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.74□□□□□ -0.21
PFDN1O60925 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.74□□□□□ -0.21
PFDN1O60925 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
PFDN1O60925 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
PFDN1O60925 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PFDN1O60925 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC13.74□□□□□ -0.21
PFDN1O60925 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
PFDN1O60925 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
PFDN1O60925 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PFDN1O60925 TNRC18P1-201ENST00000502875 3650 ntBASIC13.74□□□□□ -0.21
PFDN1O60925 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PFDN1O60925 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PFDN1O60925 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PFDN1O60925 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PFDN1O60925 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PFDN1O60925 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PFDN1O60925 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PFDN1O60925 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PFDN1O60925 HAUS4P1-201ENST00000406739 1145 ntBASIC13.74□□□□□ -0.21
PFDN1O60925 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PFDN1O60925 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC13.74□□□□□ -0.21
PFDN1O60925 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.74□□□□□ -0.21
PFDN1O60925 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
PFDN1O60925 AC111152.3-201ENST00000569699 673 ntBASIC13.74□□□□□ -0.21
PFDN1O60925 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC13.74□□□□□ -0.21
PFDN1O60925 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13.74□□□□□ -0.21
PFDN1O60925 AC080038.1-201ENST00000611274 1154 ntBASIC13.74□□□□□ -0.21
PFDN1O60925 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC13.74□□□□□ -0.21
PFDN1O60925 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC13.74□□□□□ -0.21
PFDN1O60925 AC073111.5-205ENST00000641717 521 ntBASIC13.74□□□□□ -0.21
PFDN1O60925 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC13.74□□□□□ -0.21
PFDN1O60925 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PFDN1O60925 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PFDN1O60925 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
PFDN1O60925 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PFDN1O60925 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PFDN1O60925 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC13.74□□□□□ -0.21
PFDN1O60925 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PFDN1O60925 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PFDN1O60925 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PFDN1O60925 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.74□□□□□ -0.21
PFDN1O60925 AC112176.1-201ENST00000565428 3024 ntBASIC13.74□□□□□ -0.21
PFDN1O60925 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PFDN1O60925 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PFDN1O60925 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PFDN1O60925 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PFDN1O60925 AC010536.1-201ENST00000538868 2611 ntBASIC13.74□□□□□ -0.21
PFDN1O60925 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.74□□□□□ -0.21
PFDN1O60925 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PFDN1O60925 PBK-203ENST00000522944 1499 ntTSL 2 BASIC13.74□□□□□ -0.21
PFDN1O60925 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
PFDN1O60925 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.74□□□□□ -0.21
PFDN1O60925 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PFDN1O60925 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.73□□□□□ -0.21
PFDN1O60925 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PFDN1O60925 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PFDN1O60925 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PFDN1O60925 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PFDN1O60925 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
PFDN1O60925 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PFDN1O60925 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PFDN1O60925 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PFDN1O60925 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PFDN1O60925 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PFDN1O60925 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PFDN1O60925 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PFDN1O60925 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PFDN1O60925 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
PFDN1O60925 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PFDN1O60925 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC13.73□□□□□ -0.21
PFDN1O60925 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
PFDN1O60925 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PFDN1O60925 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PFDN1O60925 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
PFDN1O60925 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PFDN1O60925 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC13.73□□□□□ -0.21
PFDN1O60925 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.73□□□□□ -0.21
PFDN1O60925 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.73□□□□□ -0.21
PFDN1O60925 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC13.73□□□□□ -0.21
PFDN1O60925 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms