Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 IGHV3-42-201ENST00000520410 361 ntBASIC14.22□□□□□ -0.13
CDHR4A6H8M9 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 TIMM17BP1-201ENST00000545713 516 ntBASIC14.22□□□□□ -0.13
CDHR4A6H8M9 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 AP000845.1-201ENST00000581677 2131 ntBASIC14.22□□□□□ -0.13
CDHR4A6H8M9 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 AJ011931.1-201ENST00000618749 2492 ntBASIC14.22□□□□□ -0.13
CDHR4A6H8M9 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDHR4A6H8M9 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 AC009407.1-201ENST00000568958 598 ntBASIC14.21□□□□□ -0.13
CDHR4A6H8M9 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDHR4A6H8M9 FGD5P1-202ENST00000614866 2498 ntBASIC14.21□□□□□ -0.13
CDHR4A6H8M9 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CDHR4A6H8M9 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDHR4A6H8M9 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDHR4A6H8M9 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDHR4A6H8M9 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDHR4A6H8M9 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDHR4A6H8M9 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CDHR4A6H8M9 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CDHR4A6H8M9 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDHR4A6H8M9 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDHR4A6H8M9 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDHR4A6H8M9 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
CDHR4A6H8M9 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDHR4A6H8M9 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
CDHR4A6H8M9 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDHR4A6H8M9 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.2□□□□□ -0.14
CDHR4A6H8M9 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDHR4A6H8M9 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDHR4A6H8M9 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDHR4A6H8M9 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDHR4A6H8M9 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CDHR4A6H8M9 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.2□□□□□ -0.14
CDHR4A6H8M9 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CDHR4A6H8M9 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDHR4A6H8M9 ACE3P-201ENST00000423435 1973 ntBASIC14.2□□□□□ -0.14
CDHR4A6H8M9 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.2□□□□□ -0.14
CDHR4A6H8M9 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDHR4A6H8M9 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.2□□□□□ -0.14
CDHR4A6H8M9 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDHR4A6H8M9 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms