Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 SLC25A6P2-201ENST00000497974 877 ntBASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 AC107918.2-201ENST00000530817 355 ntBASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 AP005117.1-201ENST00000584346 1413 ntBASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.06□□□□□ -0.16
CROCCP3Q8IVE0 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 AC004241.5-201ENST00000623870 2448 ntBASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 PEG13-201ENST00000631594 5667 ntBASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 IGHV3-47-201ENST00000425060 335 ntBASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 AC139887.3-201ENST00000568585 713 ntBASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 KRT18P1-202ENST00000452408 1331 ntBASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms