RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 NISCHQ9Y2I1 1504 aa24.2■■□□□ 1.46
SPTSSB-201ENST00000359175 HRCP23327 699 aa22.7■■□□□ 1.22
SPTSSB-201ENST00000359175 PELP1Q8IZL8 1130 aaKnown RBP22.69■■□□□ 1.22
SPTSSB-201ENST00000359175 PPARGC1BQ86YN6 1023 aaKnown RBP22.05■■□□□ 1.12
SPTSSB-201ENST00000359175 MYT1Q01538 1121 aa21.99■■□□□ 1.11
SPTSSB-201ENST00000359175 PCGF6Q9BYE7 350 aa21.91■■□□□ 1.1
SPTSSB-201ENST00000359175 SCAF1Q9H7N4 1312 aaKnown RBP21.71■■□□□ 1.07
SPTSSB-201ENST00000359175 MYO15BQ96JP2 1530 aa21.7■■□□□ 1.06
SPTSSB-201ENST00000359175 SUPT5HO00267 1087 aaKnown RBP21.51■■□□□ 1.03
SPTSSB-201ENST00000359175 DCAF1Q9Y4B6 1507 aa21.51■■□□□ 1.03
SPTSSB-201ENST00000359175 CHIC1Q5VXU3 224 aa21.47■■□□□ 1.03
SPTSSB-201ENST00000359175 SHROOM4Q9ULL8 1493 aa21.42■■□□□ 1.02
SPTSSB-201ENST00000359175 CCDC180Q9P1Z9 1646 aa21.33■■□□□ 1.01
SPTSSB-201ENST00000359175 ZEB1P37275 1124 aaPredicted RBP21.29■■□□□ 1
SPTSSB-201ENST00000359175 TRIM26Q12899 539 aaPredicted RBP21.26■□□□□ 0.99
SPTSSB-201ENST00000359175 ACIN1Q9UKV3 1341 aaKnown RBP21.03■□□□□ 0.96
SPTSSB-201ENST00000359175 NEUROD1Q13562 356 aa20.9■□□□□ 0.94
SPTSSB-201ENST00000359175 LOC105371045A0A1W2PR82 267 aa20.88■□□□□ 0.93
SPTSSB-201ENST00000359175 TTBK1Q5TCY1 1321 aaPredicted RBP20.84■□□□□ 0.93
SPTSSB-201ENST00000359175 GTF3C3Q9Y5Q9 886 aa20.81■□□□□ 0.92
SPTSSB-201ENST00000359175 CENPBP07199 599 aaPredicted RBP20.71■□□□□ 0.91
SPTSSB-201ENST00000359175 ZCCHC6Q5VYS8 1495 aaKnown RBP20.68■□□□□ 0.9
SPTSSB-201ENST00000359175 DIEXFQ68CQ4 756 aaKnown RBP20.42■□□□□ 0.86
SPTSSB-201ENST00000359175 BCL11AQ9H165 835 aa20.42■□□□□ 0.86
SPTSSB-201ENST00000359175 FAM9AQ8IZU1 332 aaPredicted RBP20.26■□□□□ 0.83
SPTSSB-201ENST00000359175 CCER1Q8TC90 406 aaPredicted RBP20.17■□□□□ 0.82
SPTSSB-201ENST00000359175 TRIM41Q8WV44 630 aa20.17■□□□□ 0.82
SPTSSB-201ENST00000359175 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.16■□□□□ 0.82
SPTSSB-201ENST00000359175 ANP32EQ9BTT0 268 aa20.12■□□□□ 0.81
SPTSSB-201ENST00000359175 PRKCSHP14314 528 aaPredicted RBP20■□□□□ 0.79
SPTSSB-201ENST00000359175 ZNF316A6NFI3 1004 aaPredicted RBP19.98■□□□□ 0.79
SPTSSB-201ENST00000359175 YTHDC1Q96MU7 727 aaKnown RBP19.97■□□□□ 0.79
SPTSSB-201ENST00000359175 CLSPNQ9HAW4 1339 aa19.91■□□□□ 0.78
SPTSSB-201ENST00000359175 CSRNP3Q8WYN3 585 aa19.87■□□□□ 0.77
SPTSSB-201ENST00000359175 MIER1Q8N108 512 aa19.84■□□□□ 0.77
SPTSSB-201ENST00000359175 TSHZ2Q9NRE2 1034 aa19.81■□□□□ 0.76
SPTSSB-201ENST00000359175 SUPT16HQ9Y5B9 1047 aaKnown RBP19.76■□□□□ 0.75
SPTSSB-201ENST00000359175 ABCC9O60706 1549 aa19.74■□□□□ 0.75
SPTSSB-201ENST00000359175 DCAF8L2P0C7V8 631 aa19.74■□□□□ 0.75
SPTSSB-201ENST00000359175 EHMT2Q96KQ7 1210 aa19.63■□□□□ 0.73
SPTSSB-201ENST00000359175 WRNQ14191 1432 aaPredicted RBP eCLIP19.59■□□□□ 0.73
SPTSSB-201ENST00000359175 RSF1Q96T23 1441 aaPredicted RBP19.58■□□□□ 0.73
SPTSSB-201ENST00000359175 ERICH6Q7L0X2 663 aa19.57■□□□□ 0.72
SPTSSB-201ENST00000359175 RB1CC1Q8TDY2 1594 aa19.55■□□□□ 0.72
SPTSSB-201ENST00000359175 APLP2Q06481 763 aa19.42■□□□□ 0.7
SPTSSB-201ENST00000359175 CEP162Q5TB80 1403 aa19.27■□□□□ 0.68
SPTSSB-201ENST00000359175 RBM19Q9Y4C8 960 aaKnown RBP19.27■□□□□ 0.68
SPTSSB-201ENST00000359175 MSH5O43196 834 aa19.18■□□□□ 0.66
SPTSSB-201ENST00000359175 TNIKQ9UKE5 1360 aa19.18■□□□□ 0.66
SPTSSB-201ENST00000359175 BCANQ96GW7 911 aa19.11■□□□□ 0.65
SPTSSB-201ENST00000359175 MYT1LQ9UL68 1186 aa19.11■□□□□ 0.65
SPTSSB-201ENST00000359175 FKBP8Q14318 412 aa19.09■□□□□ 0.65
SPTSSB-201ENST00000359175 EIF4G1Q04637 1599 aaKnown RBP19.09■□□□□ 0.65
SPTSSB-201ENST00000359175 HNRNPUL2Q1KMD3 747 aaKnown RBP19.08■□□□□ 0.65
SPTSSB-201ENST00000359175 ANO8Q9HCE9 1232 aaPredicted RBP19.06■□□□□ 0.64
SPTSSB-201ENST00000359175 FANCIQ9NVI1 1328 aa19.05■□□□□ 0.64
SPTSSB-201ENST00000359175 SCRIBQ14160 1630 aa19■□□□□ 0.63
SPTSSB-201ENST00000359175 NEFLP07196 543 aa18.95■□□□□ 0.62
SPTSSB-201ENST00000359175 DEKP35659 375 aaKnown RBP18.95■□□□□ 0.62
SPTSSB-201ENST00000359175 EEA1Q15075 1411 aa18.93■□□□□ 0.62
SPTSSB-201ENST00000359175 KCNH8Q96L42 1107 aa18.92■□□□□ 0.62
SPTSSB-201ENST00000359175 DHX57Q6P158 1386 aaKnown RBP18.92■□□□□ 0.62
SPTSSB-201ENST00000359175 CCDC88BA6NC98 1476 aa18.91■□□□□ 0.62
SPTSSB-201ENST00000359175 ABCC8Q09428 1581 aa18.9■□□□□ 0.62
SPTSSB-201ENST00000359175 MROH2BQ7Z745 1585 aa18.88■□□□□ 0.61
SPTSSB-201ENST00000359175 ERICH6BQ5W0A0 696 aa18.86■□□□□ 0.61
SPTSSB-201ENST00000359175 GOLGA3Q08378 1498 aa18.85■□□□□ 0.61
SPTSSB-201ENST00000359175 WIZO95785 1651 aa18.85■□□□□ 0.61
SPTSSB-201ENST00000359175 SOGA1O94964 1423 aa18.85■□□□□ 0.61
SPTSSB-201ENST00000359175 ITGAEP38570 1179 aa18.85■□□□□ 0.61
SPTSSB-201ENST00000359175 UBTFP17480 764 aaKnown RBP18.84■□□□□ 0.61
SPTSSB-201ENST00000359175 SALL2Q9Y467 1007 aaPredicted RBP18.83■□□□□ 0.6
SPTSSB-201ENST00000359175 CECR2Q9BXF3 1484 aa18.82■□□□□ 0.6
SPTSSB-201ENST00000359175 BAZ1AQ9NRL2 1556 aaPredicted RBP18.82■□□□□ 0.6
SPTSSB-201ENST00000359175 UBE2Q2Q8WVN8 375 aa18.78■□□□□ 0.6
SPTSSB-201ENST00000359175 VPS8Q8N3P4 1428 aa18.75■□□□□ 0.59
SPTSSB-201ENST00000359175 CDK11AQ9UQ88 783 aaPredicted RBP18.75■□□□□ 0.59
SPTSSB-201ENST00000359175 CLIP1P30622 1438 aa18.72■□□□□ 0.59
SPTSSB-201ENST00000359175 RUSC2Q8N2Y8 1516 aa18.71■□□□□ 0.59
SPTSSB-201ENST00000359175 NACADO15069 1562 aa18.69■□□□□ 0.58
SPTSSB-201ENST00000359175 CCER2I3L3R5 266 aa18.67■□□□□ 0.58
SPTSSB-201ENST00000359175 CCDC136Q96JN2 1154 aa18.64■□□□□ 0.57
SPTSSB-201ENST00000359175 KIF21BO75037 1637 aa18.64■□□□□ 0.57
SPTSSB-201ENST00000359175 CEP164Q9UPV0 1460 aa18.63■□□□□ 0.57
SPTSSB-201ENST00000359175 CUX2O14529 1486 aa18.62■□□□□ 0.57
SPTSSB-201ENST00000359175 TRIM52Q96A61 297 aa18.6■□□□□ 0.57
SPTSSB-201ENST00000359175 PPP1R15AO75807 674 aaPredicted RBP18.58■□□□□ 0.56
SPTSSB-201ENST00000359175 DDX10Q13206 875 aaKnown RBP18.58■□□□□ 0.56
SPTSSB-201ENST00000359175 NOP58Q9Y2X3 529 aaKnown RBP18.55■□□□□ 0.56
SPTSSB-201ENST00000359175 BAZ1BQ9UIG0 1483 aaKnown RBP18.54■□□□□ 0.56
SPTSSB-201ENST00000359175 TOP2AP11388 1531 aaKnown RBP18.54■□□□□ 0.56
SPTSSB-201ENST00000359175 IL27Q8NEV9 243 aa18.52■□□□□ 0.55
SPTSSB-201ENST00000359175 RRBP1Q9P2E9 1410 aaKnown RBP18.5■□□□□ 0.55
SPTSSB-201ENST00000359175 NBR1Q14596 966 aa18.5■□□□□ 0.55
SPTSSB-201ENST00000359175 ANP32CO43423 234 aa18.49■□□□□ 0.55
SPTSSB-201ENST00000359175 SMARCA2P51531 1590 aa18.49■□□□□ 0.55
SPTSSB-201ENST00000359175 PPP4R2Q9NY27 417 aa18.47■□□□□ 0.55
SPTSSB-201ENST00000359175 MAPKBP1O60336 1514 aa18.47■□□□□ 0.55
SPTSSB-201ENST00000359175 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.46■□□□□ 0.55
SPTSSB-201ENST00000359175 PAK3O75914 559 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms