Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 AL035456.1-201ENST00000456064 1369 ntBASIC13.95□□□□□ -0.18
HLA-DQA2P01906 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.95□□□□□ -0.18
HLA-DQA2P01906 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 AGAP7P-201ENST00000582299 2062 ntBASIC13.94□□□□□ -0.18
HLA-DQA2P01906 AGAP14-201ENST00000624701 2060 ntBASIC13.94□□□□□ -0.18
HLA-DQA2P01906 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 FO393414.2-201ENST00000405153 598 ntBASIC13.94□□□□□ -0.18
HLA-DQA2P01906 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 AC136604.1-201ENST00000418535 575 ntBASIC13.94□□□□□ -0.18
HLA-DQA2P01906 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 YBX1P5-201ENST00000509441 847 ntBASIC13.94□□□□□ -0.18
HLA-DQA2P01906 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA2P01906 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.93□□□□□ -0.18
HLA-DQA2P01906 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 AC211486.1-202ENST00000416371 468 ntBASIC13.93□□□□□ -0.18
HLA-DQA2P01906 SPDYE7P-202ENST00000420373 878 ntBASIC13.93□□□□□ -0.18
HLA-DQA2P01906 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 SPDYE14P-201ENST00000442619 822 ntBASIC13.93□□□□□ -0.18
HLA-DQA2P01906 AC023141.5-201ENST00000458585 616 ntBASIC13.93□□□□□ -0.18
HLA-DQA2P01906 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 AC112482.1-201ENST00000492080 688 ntBASIC13.93□□□□□ -0.18
HLA-DQA2P01906 AC211476.1-201ENST00000503899 468 ntBASIC13.93□□□□□ -0.18
HLA-DQA2P01906 BANF1P1-201ENST00000553684 263 ntBASIC13.93□□□□□ -0.18
HLA-DQA2P01906 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 AC093520.2-201ENST00000561830 333 ntBASIC13.93□□□□□ -0.18
HLA-DQA2P01906 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 MIR4453-201ENST00000584019 89 ntBASIC13.93□□□□□ -0.18
HLA-DQA2P01906 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 AC007967.4-201ENST00000614700 386 ntBASIC13.93□□□□□ -0.18
HLA-DQA2P01906 DMBT1P1-203ENST00000636837 4628 ntBASIC13.93□□□□□ -0.18
HLA-DQA2P01906 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms