Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NDUFS3O75489 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NDUFS3O75489 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NDUFS3O75489 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
NDUFS3O75489 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.44■□□□□ 0.06
NDUFS3O75489 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.44■□□□□ 0.06
NDUFS3O75489 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.44■□□□□ 0.06
NDUFS3O75489 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.44■□□□□ 0.06
NDUFS3O75489 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.44■□□□□ 0.06
NDUFS3O75489 MEIS3P1-201ENST00000495167 958 ntBASIC15.44■□□□□ 0.06
NDUFS3O75489 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
NDUFS3O75489 RFPL4AP1-201ENST00000530883 850 ntBASIC15.44■□□□□ 0.06
NDUFS3O75489 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.44■□□□□ 0.06
NDUFS3O75489 AC092337.1-201ENST00000568699 1129 ntBASIC15.44■□□□□ 0.06
NDUFS3O75489 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.44■□□□□ 0.06
NDUFS3O75489 AC025181.2-201ENST00000606994 802 ntBASIC15.44■□□□□ 0.06
NDUFS3O75489 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
NDUFS3O75489 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NDUFS3O75489 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
NDUFS3O75489 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
NDUFS3O75489 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NDUFS3O75489 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NDUFS3O75489 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NDUFS3O75489 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NDUFS3O75489 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NDUFS3O75489 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
NDUFS3O75489 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFS3O75489 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFS3O75489 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.43■□□□□ 0.06
NDUFS3O75489 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.43■□□□□ 0.06
NDUFS3O75489 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
NDUFS3O75489 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFS3O75489 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
NDUFS3O75489 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.43■□□□□ 0.06
NDUFS3O75489 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFS3O75489 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFS3O75489 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFS3O75489 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFS3O75489 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFS3O75489 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFS3O75489 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.43■□□□□ 0.06
NDUFS3O75489 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFS3O75489 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
NDUFS3O75489 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFS3O75489 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFS3O75489 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
NDUFS3O75489 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.43■□□□□ 0.06
NDUFS3O75489 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.43■□□□□ 0.06
NDUFS3O75489 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.43■□□□□ 0.06
NDUFS3O75489 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.43■□□□□ 0.06
NDUFS3O75489 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.43■□□□□ 0.06
NDUFS3O75489 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.43■□□□□ 0.06
NDUFS3O75489 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
NDUFS3O75489 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.43■□□□□ 0.06
NDUFS3O75489 AL390955.2-201ENST00000603032 514 ntBASIC15.43■□□□□ 0.06
NDUFS3O75489 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.43■□□□□ 0.06
NDUFS3O75489 AC008738.7-201ENST00000609744 511 ntBASIC15.43■□□□□ 0.06
NDUFS3O75489 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.43■□□□□ 0.06
NDUFS3O75489 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
NDUFS3O75489 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFS3O75489 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFS3O75489 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFS3O75489 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.43■□□□□ 0.06
NDUFS3O75489 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
NDUFS3O75489 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFS3O75489 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFS3O75489 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFS3O75489 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.43■□□□□ 0.06
NDUFS3O75489 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFS3O75489 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFS3O75489 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
NDUFS3O75489 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFS3O75489 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFS3O75489 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.43■□□□□ 0.06
NDUFS3O75489 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFS3O75489 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFS3O75489 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFS3O75489 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
NDUFS3O75489 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.42■□□□□ 0.06
NDUFS3O75489 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.42■□□□□ 0.06
NDUFS3O75489 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
NDUFS3O75489 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
NDUFS3O75489 TNRC18P2-201ENST00000417666 2714 ntBASIC15.42■□□□□ 0.06
NDUFS3O75489 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.42■□□□□ 0.06
NDUFS3O75489 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.42■□□□□ 0.06
NDUFS3O75489 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.42■□□□□ 0.06
NDUFS3O75489 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms