Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TSPAN4O14817 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.12□□□□□ -0.31
TSPAN4O14817 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TSPAN4O14817 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TSPAN4O14817 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TSPAN4O14817 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.12□□□□□ -0.31
TSPAN4O14817 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
TSPAN4O14817 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TSPAN4O14817 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TSPAN4O14817 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TSPAN4O14817 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TSPAN4O14817 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TSPAN4O14817 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TSPAN4O14817 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.12□□□□□ -0.31
TSPAN4O14817 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.12□□□□□ -0.31
TSPAN4O14817 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TSPAN4O14817 PRYP5-201ENST00000451909 266 ntBASIC13.12□□□□□ -0.31
TSPAN4O14817 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.12□□□□□ -0.31
TSPAN4O14817 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.12□□□□□ -0.31
TSPAN4O14817 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.12□□□□□ -0.31
TSPAN4O14817 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.12□□□□□ -0.31
TSPAN4O14817 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.12□□□□□ -0.31
TSPAN4O14817 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TSPAN4O14817 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
TSPAN4O14817 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TSPAN4O14817 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TSPAN4O14817 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TSPAN4O14817 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TSPAN4O14817 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TSPAN4O14817 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TSPAN4O14817 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC13.12□□□□□ -0.31
TSPAN4O14817 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
TSPAN4O14817 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.12□□□□□ -0.31
TSPAN4O14817 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TSPAN4O14817 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TSPAN4O14817 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TSPAN4O14817 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
TSPAN4O14817 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TSPAN4O14817 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.12□□□□□ -0.31
TSPAN4O14817 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TSPAN4O14817 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TSPAN4O14817 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TSPAN4O14817 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.11□□□□□ -0.31
TSPAN4O14817 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.11□□□□□ -0.31
TSPAN4O14817 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TSPAN4O14817 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.11□□□□□ -0.31
TSPAN4O14817 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.11□□□□□ -0.31
TSPAN4O14817 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TSPAN4O14817 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TSPAN4O14817 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.11□□□□□ -0.31
TSPAN4O14817 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.11□□□□□ -0.31
TSPAN4O14817 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.11□□□□□ -0.31
TSPAN4O14817 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.11□□□□□ -0.31
TSPAN4O14817 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.11□□□□□ -0.31
TSPAN4O14817 AL022326.1-202ENST00000641533 845 ntBASIC13.11□□□□□ -0.31
TSPAN4O14817 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.11□□□□□ -0.31
TSPAN4O14817 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.11□□□□□ -0.31
TSPAN4O14817 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.11□□□□□ -0.31
TSPAN4O14817 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
TSPAN4O14817 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
TSPAN4O14817 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
TSPAN4O14817 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TSPAN4O14817 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TSPAN4O14817 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.1□□□□□ -0.31
TSPAN4O14817 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TSPAN4O14817 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TSPAN4O14817 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TSPAN4O14817 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TSPAN4O14817 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TSPAN4O14817 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TSPAN4O14817 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms