Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 IRF3-215ENST00000596822 823 ntTSL 3 BASIC20.68■□□□□ 0.9
PHF8Q9UPP1 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC20.68■□□□□ 0.9
PHF8Q9UPP1 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PHF8Q9UPP1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PHF8Q9UPP1 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PHF8Q9UPP1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHF8Q9UPP1 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC20.67■□□□□ 0.9
PHF8Q9UPP1 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.67■□□□□ 0.9
PHF8Q9UPP1 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC20.67■□□□□ 0.9
PHF8Q9UPP1 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC20.67■□□□□ 0.9
PHF8Q9UPP1 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHF8Q9UPP1 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHF8Q9UPP1 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PHF8Q9UPP1 RBM38-204ENST00000371219 760 ntTSL 2 BASIC20.67■□□□□ 0.9
PHF8Q9UPP1 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC20.67■□□□□ 0.9
PHF8Q9UPP1 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PHF8Q9UPP1 NEU3-205ENST00000531619 582 ntTSL 5 BASIC20.67■□□□□ 0.9
PHF8Q9UPP1 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC20.67■□□□□ 0.9
PHF8Q9UPP1 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC20.67■□□□□ 0.9
PHF8Q9UPP1 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
PHF8Q9UPP1 AC132192.2-201ENST00000596206 1147 ntBASIC20.67■□□□□ 0.9
PHF8Q9UPP1 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC20.67■□□□□ 0.9
PHF8Q9UPP1 AL805961.1-201ENST00000642026 753 ntBASIC20.67■□□□□ 0.9
PHF8Q9UPP1 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHF8Q9UPP1 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC20.67■□□□□ 0.9
PHF8Q9UPP1 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC20.67■□□□□ 0.9
PHF8Q9UPP1 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHF8Q9UPP1 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHF8Q9UPP1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHF8Q9UPP1 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHF8Q9UPP1 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHF8Q9UPP1 AC020910.5-201ENST00000623668 1865 ntBASIC20.67■□□□□ 0.9
PHF8Q9UPP1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHF8Q9UPP1 AC092127.1-201ENST00000567093 3455 ntBASIC20.66■□□□□ 0.9
PHF8Q9UPP1 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHF8Q9UPP1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.66■□□□□ 0.9
PHF8Q9UPP1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.66■□□□□ 0.9
PHF8Q9UPP1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PHF8Q9UPP1 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC20.66■□□□□ 0.9
PHF8Q9UPP1 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHF8Q9UPP1 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHF8Q9UPP1 LBH-202ENST00000401506 485 ntTSL 3 BASIC20.66■□□□□ 0.9
PHF8Q9UPP1 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PHF8Q9UPP1 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PHF8Q9UPP1 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC20.66■□□□□ 0.9
PHF8Q9UPP1 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC20.66■□□□□ 0.9
PHF8Q9UPP1 CFL1-206ENST00000527344 962 ntTSL 2 BASIC20.66■□□□□ 0.9
PHF8Q9UPP1 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
PHF8Q9UPP1 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
PHF8Q9UPP1 AC008805.1-201ENST00000590892 364 ntBASIC20.66■□□□□ 0.9
PHF8Q9UPP1 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC20.66■□□□□ 0.9
PHF8Q9UPP1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHF8Q9UPP1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHF8Q9UPP1 FAM90A7P-201ENST00000382628 1395 ntBASIC20.66■□□□□ 0.9
PHF8Q9UPP1 FAM90A23P-201ENST00000400136 1395 ntBASIC20.66■□□□□ 0.9
PHF8Q9UPP1 TBC1D3J-201ENST00000620719 1426 ntBASIC20.66■□□□□ 0.9
PHF8Q9UPP1 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PHF8Q9UPP1 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHF8Q9UPP1 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC20.66■□□□□ 0.9
PHF8Q9UPP1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.66■□□□□ 0.9
PHF8Q9UPP1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.66■□□□□ 0.9
PHF8Q9UPP1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.66■□□□□ 0.9
PHF8Q9UPP1 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHF8Q9UPP1 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC20.66■□□□□ 0.9
PHF8Q9UPP1 AC138932.1-201ENST00000534164 6830 ntBASIC20.66■□□□□ 0.9
PHF8Q9UPP1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 MBLAC2-202ENST00000514906 1936 ntBASIC20.65■□□□□ 0.9
PHF8Q9UPP1 AMT-239ENST00000636865 1914 ntTSL 5 BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 AC244394.1-201ENST00000435000 1665 ntBASIC20.65■□□□□ 0.9
PHF8Q9UPP1 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 RPSAP31-201ENST00000416648 895 ntBASIC20.65■□□□□ 0.9
PHF8Q9UPP1 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms