Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CALYQ9NYX4 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.82□□□□□ -0.36
CALYQ9NYX4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.82□□□□□ -0.36
CALYQ9NYX4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.82□□□□□ -0.36
CALYQ9NYX4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.82□□□□□ -0.36
CALYQ9NYX4 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.82□□□□□ -0.36
CALYQ9NYX4 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.82□□□□□ -0.36
CALYQ9NYX4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.82□□□□□ -0.36
CALYQ9NYX4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.82□□□□□ -0.36
CALYQ9NYX4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.82□□□□□ -0.36
CALYQ9NYX4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.82□□□□□ -0.36
CALYQ9NYX4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.82□□□□□ -0.36
CALYQ9NYX4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.82□□□□□ -0.36
CALYQ9NYX4 AC004890.2-204ENST00000481968 304 ntBASIC12.82□□□□□ -0.36
CALYQ9NYX4 AC093214.1-201ENST00000511688 1107 ntBASIC12.82□□□□□ -0.36
CALYQ9NYX4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.82□□□□□ -0.36
CALYQ9NYX4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
CALYQ9NYX4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.82□□□□□ -0.36
CALYQ9NYX4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.82□□□□□ -0.36
CALYQ9NYX4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.82□□□□□ -0.36
CALYQ9NYX4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC12.82□□□□□ -0.36
CALYQ9NYX4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.82□□□□□ -0.36
CALYQ9NYX4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 AGAP7P-201ENST00000582299 2062 ntBASIC12.82□□□□□ -0.36
CALYQ9NYX4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 AGAP14-201ENST00000624701 2060 ntBASIC12.82□□□□□ -0.36
CALYQ9NYX4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.82□□□□□ -0.36
CALYQ9NYX4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CALYQ9NYX4 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
CALYQ9NYX4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CALYQ9NYX4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CALYQ9NYX4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.81□□□□□ -0.36
CALYQ9NYX4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CALYQ9NYX4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CALYQ9NYX4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.81□□□□□ -0.36
CALYQ9NYX4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CALYQ9NYX4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CALYQ9NYX4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.81□□□□□ -0.36
CALYQ9NYX4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CALYQ9NYX4 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CALYQ9NYX4 AL365209.1-201ENST00000624418 6473 ntBASIC12.81□□□□□ -0.36
CALYQ9NYX4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CALYQ9NYX4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CALYQ9NYX4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
CALYQ9NYX4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CALYQ9NYX4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CALYQ9NYX4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CALYQ9NYX4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.81□□□□□ -0.36
CALYQ9NYX4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.81□□□□□ -0.36
CALYQ9NYX4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.81□□□□□ -0.36
CALYQ9NYX4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CALYQ9NYX4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CALYQ9NYX4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CALYQ9NYX4 PMS2P2-201ENST00000425039 1128 ntBASIC12.81□□□□□ -0.36
CALYQ9NYX4 FAM8A3P-201ENST00000427218 844 ntBASIC12.81□□□□□ -0.36
CALYQ9NYX4 GHSR-202ENST00000427970 912 ntBASIC12.81□□□□□ -0.36
CALYQ9NYX4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.81□□□□□ -0.36
CALYQ9NYX4 MEIS3P1-201ENST00000495167 958 ntBASIC12.81□□□□□ -0.36
CALYQ9NYX4 RFPL4AP1-201ENST00000530883 850 ntBASIC12.81□□□□□ -0.36
CALYQ9NYX4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.81□□□□□ -0.36
CALYQ9NYX4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.81□□□□□ -0.36
CALYQ9NYX4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC12.81□□□□□ -0.36
CALYQ9NYX4 AL390955.2-201ENST00000603032 514 ntBASIC12.81□□□□□ -0.36
CALYQ9NYX4 AC008738.7-201ENST00000609744 511 ntBASIC12.81□□□□□ -0.36
CALYQ9NYX4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CALYQ9NYX4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CALYQ9NYX4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC12.81□□□□□ -0.36
CALYQ9NYX4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CALYQ9NYX4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.81□□□□□ -0.36
CALYQ9NYX4 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CALYQ9NYX4 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CALYQ9NYX4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CALYQ9NYX4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CALYQ9NYX4 AC068418.2-201ENST00000577309 3703 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms