Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.59□□□□□ -0.23
TMEM54Q969K7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.59□□□□□ -0.23
TMEM54Q969K7 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TMEM54Q969K7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.59□□□□□ -0.23
TMEM54Q969K7 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
TMEM54Q969K7 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.59□□□□□ -0.23
TMEM54Q969K7 AC120045.2-201ENST00000567334 178 ntBASIC13.59□□□□□ -0.23
TMEM54Q969K7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.59□□□□□ -0.23
TMEM54Q969K7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.59□□□□□ -0.23
TMEM54Q969K7 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TMEM54Q969K7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.59□□□□□ -0.23
TMEM54Q969K7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.59□□□□□ -0.23
TMEM54Q969K7 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
TMEM54Q969K7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 TNRC18P2-201ENST00000417666 2714 ntBASIC13.59□□□□□ -0.23
TMEM54Q969K7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.59□□□□□ -0.23
TMEM54Q969K7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.59□□□□□ -0.23
TMEM54Q969K7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TMEM54Q969K7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TMEM54Q969K7 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TMEM54Q969K7 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.59□□□□□ -0.23
TMEM54Q969K7 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
TMEM54Q969K7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TMEM54Q969K7 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.58□□□□□ -0.23
TMEM54Q969K7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TMEM54Q969K7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM54Q969K7 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM54Q969K7 LINC00528-201ENST00000600723 2160 ntBASIC13.58□□□□□ -0.24
TMEM54Q969K7 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
TMEM54Q969K7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM54Q969K7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.58□□□□□ -0.24
TMEM54Q969K7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.58□□□□□ -0.24
TMEM54Q969K7 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.58□□□□□ -0.24
TMEM54Q969K7 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.58□□□□□ -0.24
TMEM54Q969K7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM54Q969K7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM54Q969K7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.58□□□□□ -0.24
TMEM54Q969K7 AL645937.2-201ENST00000396808 931 ntBASIC13.58□□□□□ -0.24
TMEM54Q969K7 PIN1P1-201ENST00000412108 996 ntBASIC13.58□□□□□ -0.24
TMEM54Q969K7 MYCLP2-201ENST00000449268 967 ntBASIC13.58□□□□□ -0.24
TMEM54Q969K7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.58□□□□□ -0.24
TMEM54Q969K7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.58□□□□□ -0.24
TMEM54Q969K7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM54Q969K7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.58□□□□□ -0.24
TMEM54Q969K7 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TMEM54Q969K7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.58□□□□□ -0.24
TMEM54Q969K7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM54Q969K7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM54Q969K7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.58□□□□□ -0.24
TMEM54Q969K7 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM54Q969K7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.58□□□□□ -0.24
TMEM54Q969K7 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM54Q969K7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM54Q969K7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM54Q969K7 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
TMEM54Q969K7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM54Q969K7 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.58□□□□□ -0.24
TMEM54Q969K7 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.58□□□□□ -0.24
TMEM54Q969K7 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM54Q969K7 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM54Q969K7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.58□□□□□ -0.24
TMEM54Q969K7 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM54Q969K7 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM54Q969K7 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM54Q969K7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM54Q969K7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM54Q969K7 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TMEM54Q969K7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
TMEM54Q969K7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.57□□□□□ -0.24
TMEM54Q969K7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
TMEM54Q969K7 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TMEM54Q969K7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.57□□□□□ -0.24
TMEM54Q969K7 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms