Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
ERCC4Q92889 GPS2P2-201ENST00000430745 888 ntBASIC17.63■□□□□ 0.41
ERCC4Q92889 AC005237.2-201ENST00000434368 219 ntBASIC17.63■□□□□ 0.41
ERCC4Q92889 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.63■□□□□ 0.41
ERCC4Q92889 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.63■□□□□ 0.41
ERCC4Q92889 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.63■□□□□ 0.41
ERCC4Q92889 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.63■□□□□ 0.41
ERCC4Q92889 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC4Q92889 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC4Q92889 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC4Q92889 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC4Q92889 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.63■□□□□ 0.41
ERCC4Q92889 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC4Q92889 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ERCC4Q92889 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC4Q92889 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC4Q92889 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC4Q92889 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC4Q92889 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC4Q92889 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.62■□□□□ 0.41
ERCC4Q92889 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC4Q92889 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC4Q92889 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC4Q92889 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.62■□□□□ 0.41
ERCC4Q92889 AC232323.1-201ENST00000540724 2099 ntBASIC17.62■□□□□ 0.41
ERCC4Q92889 REXO1L5P-201ENST00000622260 2098 ntBASIC17.62■□□□□ 0.41
ERCC4Q92889 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.62■□□□□ 0.41
ERCC4Q92889 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.62■□□□□ 0.41
ERCC4Q92889 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ERCC4Q92889 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
ERCC4Q92889 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC4Q92889 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
ERCC4Q92889 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC4Q92889 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC4Q92889 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC4Q92889 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
ERCC4Q92889 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC4Q92889 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC4Q92889 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.62■□□□□ 0.41
ERCC4Q92889 AC004461.1-201ENST00000412461 403 ntBASIC17.62■□□□□ 0.41
ERCC4Q92889 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.62■□□□□ 0.41
ERCC4Q92889 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.62■□□□□ 0.41
ERCC4Q92889 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.62■□□□□ 0.41
ERCC4Q92889 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC4Q92889 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.62■□□□□ 0.41
ERCC4Q92889 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC4Q92889 AC026979.3-201ENST00000607315 403 ntBASIC17.62■□□□□ 0.41
ERCC4Q92889 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
ERCC4Q92889 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC4Q92889 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC4Q92889 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC4Q92889 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC4Q92889 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
ERCC4Q92889 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC4Q92889 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC4Q92889 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC4Q92889 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.62■□□□□ 0.41
ERCC4Q92889 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC4Q92889 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
ERCC4Q92889 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC4Q92889 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC4Q92889 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC4Q92889 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC4Q92889 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC4Q92889 CICP14-201ENST00000629111 2732 ntBASIC17.62■□□□□ 0.41
ERCC4Q92889 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC17.62■□□□□ 0.41
ERCC4Q92889 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC4Q92889 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
ERCC4Q92889 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.61■□□□□ 0.41
ERCC4Q92889 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC4Q92889 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC4Q92889 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.61■□□□□ 0.41
ERCC4Q92889 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ERCC4Q92889 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
ERCC4Q92889 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC4Q92889 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC4Q92889 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.61■□□□□ 0.41
ERCC4Q92889 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC4Q92889 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC4Q92889 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.61■□□□□ 0.41
ERCC4Q92889 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC4Q92889 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC4Q92889 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.61■□□□□ 0.41
ERCC4Q92889 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.61■□□□□ 0.41
ERCC4Q92889 MKNK2P1-201ENST00000437526 628 ntBASIC17.61■□□□□ 0.41
ERCC4Q92889 ACTG1P14-201ENST00000446382 1122 ntBASIC17.61■□□□□ 0.41
ERCC4Q92889 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
ERCC4Q92889 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC4Q92889 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.61■□□□□ 0.41
ERCC4Q92889 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.61■□□□□ 0.41
ERCC4Q92889 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.61■□□□□ 0.41
ERCC4Q92889 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.61■□□□□ 0.41
ERCC4Q92889 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
ERCC4Q92889 AC003101.2-201ENST00000612557 442 ntBASIC17.61■□□□□ 0.41
ERCC4Q92889 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC4Q92889 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC4Q92889 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC4Q92889 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.61■□□□□ 0.41
ERCC4Q92889 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC4Q92889 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms