Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.8□□□□□ -0.2
APOC1P02654 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC1P02654 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC1P02654 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
APOC1P02654 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC1P02654 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC1P02654 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
APOC1P02654 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
APOC1P02654 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
APOC1P02654 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC1P02654 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC1P02654 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
APOC1P02654 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
APOC1P02654 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
APOC1P02654 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.8□□□□□ -0.2
APOC1P02654 RPL5P21-201ENST00000404620 815 ntBASIC13.8□□□□□ -0.2
APOC1P02654 SPDYE17-201ENST00000412399 783 ntBASIC13.8□□□□□ -0.2
APOC1P02654 AC004461.1-201ENST00000412461 403 ntBASIC13.8□□□□□ -0.2
APOC1P02654 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.8□□□□□ -0.2
APOC1P02654 RBPMS2P1-201ENST00000437762 623 ntBASIC13.8□□□□□ -0.2
APOC1P02654 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC1P02654 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.8□□□□□ -0.2
APOC1P02654 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.8□□□□□ -0.2
APOC1P02654 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
APOC1P02654 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC1P02654 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.8□□□□□ -0.2
APOC1P02654 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.8□□□□□ -0.2
APOC1P02654 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
APOC1P02654 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
APOC1P02654 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
APOC1P02654 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC1P02654 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
APOC1P02654 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC1P02654 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
APOC1P02654 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC1P02654 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
APOC1P02654 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
APOC1P02654 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
APOC1P02654 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC1P02654 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.8□□□□□ -0.2
APOC1P02654 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.8□□□□□ -0.2
APOC1P02654 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC1P02654 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC1P02654 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
APOC1P02654 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.8□□□□□ -0.2
APOC1P02654 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.8□□□□□ -0.2
APOC1P02654 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.79□□□□□ -0.2
APOC1P02654 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOC1P02654 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC1P02654 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
APOC1P02654 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.79□□□□□ -0.2
APOC1P02654 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOC1P02654 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOC1P02654 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC1P02654 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
APOC1P02654 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOC1P02654 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.79□□□□□ -0.2
APOC1P02654 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC1P02654 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC1P02654 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC1P02654 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.79□□□□□ -0.2
APOC1P02654 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOC1P02654 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.79□□□□□ -0.2
APOC1P02654 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.79□□□□□ -0.2
APOC1P02654 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
APOC1P02654 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC1P02654 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.79□□□□□ -0.2
APOC1P02654 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOC1P02654 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC1P02654 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC1P02654 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC1P02654 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC1P02654 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.79□□□□□ -0.2
APOC1P02654 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC1P02654 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOC1P02654 BX842568.4-201ENST00000421222 227 ntBASIC13.79□□□□□ -0.2
APOC1P02654 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.79□□□□□ -0.2
APOC1P02654 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC1P02654 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.79□□□□□ -0.2
APOC1P02654 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOC1P02654 HNRNPUP1-201ENST00000554987 333 ntBASIC13.79□□□□□ -0.2
APOC1P02654 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOC1P02654 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOC1P02654 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.79□□□□□ -0.2
APOC1P02654 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.79□□□□□ -0.2
APOC1P02654 AL109954.1-202ENST00000564051 2148 ntBASIC13.79□□□□□ -0.2
APOC1P02654 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
APOC1P02654 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC1P02654 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOC1P02654 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.79□□□□□ -0.2
APOC1P02654 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
APOC1P02654 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
APOC1P02654 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC1P02654 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC1P02654 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.79□□□□□ -0.2
APOC1P02654 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC1P02654 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOC1P02654 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.78□□□□□ -0.2
APOC1P02654 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.78□□□□□ -0.2
APOC1P02654 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms