Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 BEND3P3-201ENST00000611030 2440 ntBASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 GRAMD4P1-201ENST00000435181 1110 ntBASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 NTF6G-201ENST00000591094 616 ntBASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 TCF20-201ENST00000335626 6237 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 PCDHB18P-202ENST00000526308 3197 ntBASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 DCLK3-201ENST00000416516 5344 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 SLC36A4-201ENST00000326402 6012 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 ZFAT-202ENST00000429442 4421 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 KBTBD12-203ENST00000405256 5268 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 MADD-202ENST00000342922 6005 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 BX640514.1-201ENST00000583223 1918 ntBASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 NRAP-204ENST00000369360 5535 ntTSL 5 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 AC016027.1-202ENST00000607927 1699 ntBASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 SCN5A-204ENST00000414099 8303 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 HGSNAT-201ENST00000379644 5236 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 TFCP2L1-201ENST00000263707 9292 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 REXO1L8P-201ENST00000604378 1897 ntBASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 RPH3A-201ENST00000389385 4679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 NUP214-203ENST00000451030 5021 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 COL4A4-201ENST00000396625 9895 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 LINC00895-201ENST00000629028 1637 ntBASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 JTB-203ENST00000368589 1216 ntTSL 2 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 MDH2-205ENST00000461263 648 ntTSL 2 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 POU5F1P6-201ENST00000466990 990 ntBASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 AP002982.1-201ENST00000492365 877 ntBASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 AL031432.3-201ENST00000607698 485 ntBASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms