RNA–Protein interactions for RNA: ENST00000301200.2

CDC42EP5-201, Transcript of CDC42 effector protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP5, Length 864 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP5-201ENST00000301200 NISCHQ9Y2I1 1504 aa49.59■■■■■ 5.53
CDC42EP5-201ENST00000301200 CCDC180Q9P1Z9 1646 aa44.28■■■■■ 4.68
CDC42EP5-201ENST00000301200 ABCC9O60706 1549 aa43.53■■■■■ 4.56
CDC42EP5-201ENST00000301200 RB1CC1Q8TDY2 1594 aa41.8■■■■■ 4.28
CDC42EP5-201ENST00000301200 NACADO15069 1562 aa41.67■■■■■ 4.26
CDC42EP5-201ENST00000301200 DCAF8L2P0C7V8 631 aa41.54■■■■■ 4.24
CDC42EP5-201ENST00000301200 MYO15BQ96JP2 1530 aa41.3■■■■■ 4.2
CDC42EP5-201ENST00000301200 ZCCHC6Q5VYS8 1495 aaKnown RBP41.26■■■■■ 4.2
CDC42EP5-201ENST00000301200 DCAF1Q9Y4B6 1507 aa41.03■■■■■ 4.16
CDC42EP5-201ENST00000301200 UNC13AQ9UPW8 1703 aa40.87■■■■■ 4.13
CDC42EP5-201ENST00000301200 PABPN1Q86U42 306 aaKnown RBP eCLIP40.58■■■■■ 4.09
CDC42EP5-201ENST00000301200 BICRAQ9NZM4 1560 aa40.48■■■■■ 4.07
CDC42EP5-201ENST00000301200 SCRIBQ14160 1630 aa40.36■■■■■ 4.05
CDC42EP5-201ENST00000301200 DNAJC5BQ9UF47 199 aa40.1■■■■■ 4.01
CDC42EP5-201ENST00000301200 SHROOM4Q9ULL8 1493 aa40.08■■■■■ 4.01
CDC42EP5-201ENST00000301200 EIF4G1Q04637 1599 aaKnown RBP39.47■■■■□ 3.91
CDC42EP5-201ENST00000301200 CC2D2AQ9P2K1 1620 aa39.38■■■■□ 3.89
CDC42EP5-201ENST00000301200 CECR2Q9BXF3 1484 aa39.15■■■■□ 3.86
CDC42EP5-201ENST00000301200 SMARCA4P51532 1647 aa38.57■■■■□ 3.77
CDC42EP5-201ENST00000301200 BAZ1AQ9NRL2 1556 aaPredicted RBP38.48■■■■□ 3.75
CDC42EP5-201ENST00000301200 NCAPD3P42695 1498 aa38.4■■■■□ 3.74
CDC42EP5-201ENST00000301200 ATAD2BQ9ULI0 1458 aa38.39■■■■□ 3.74
CDC42EP5-201ENST00000301200 SMARCA2P51531 1590 aa38.38■■■■□ 3.73
CDC42EP5-201ENST00000301200 HMGXB3Q12766 1538 aa38.24■■■■□ 3.71
CDC42EP5-201ENST00000301200 MROH2BQ7Z745 1585 aa38.2■■■■□ 3.71
CDC42EP5-201ENST00000301200 PEG3Q9GZU2 1588 aa38.18■■■■□ 3.7
CDC42EP5-201ENST00000301200 BAZ1BQ9UIG0 1483 aaKnown RBP38.1■■■■□ 3.69
CDC42EP5-201ENST00000301200 WIZO95785 1651 aa37.81■■■■□ 3.64
CDC42EP5-201ENST00000301200 RSF1Q96T23 1441 aaPredicted RBP37.64■■■■□ 3.62
CDC42EP5-201ENST00000301200 ERCC6Q03468 1493 aa37.58■■■■□ 3.61
CDC42EP5-201ENST00000301200 NESP48681 1621 aa37.57■■■■□ 3.6
CDC42EP5-201ENST00000301200 LAMC3Q9Y6N6 1575 aa37.49■■■■□ 3.59
CDC42EP5-201ENST00000301200 TOP2AP11388 1531 aaKnown RBP37.4■■■■□ 3.58
CDC42EP5-201ENST00000301200 CADPSQ9ULU8 1353 aa37.28■■■■□ 3.56
CDC42EP5-201ENST00000301200 CUX2O14529 1486 aa37.26■■■■□ 3.56
CDC42EP5-201ENST00000301200 PDS5BQ9NTI5 1447 aa37.23■■■■□ 3.55
CDC42EP5-201ENST00000301200 KIF21AQ7Z4S6 1674 aa37.18■■■■□ 3.54
CDC42EP5-201ENST00000301200 THOC2Q8NI27 1593 aaKnown RBP37.11■■■■□ 3.53
CDC42EP5-201ENST00000301200 CFTRP13569 1480 aa37■■■■□ 3.51
CDC42EP5-201ENST00000301200 CCDC88BA6NC98 1476 aa36.92■■■■□ 3.5
CDC42EP5-201ENST00000301200 CEP164Q9UPV0 1460 aa36.88■■■■□ 3.49
CDC42EP5-201ENST00000301200 FANCD2Q9BXW9 1451 aa36.87■■■■□ 3.49
CDC42EP5-201ENST00000301200 MRC2Q9UBG0 1479 aa36.87■■■■□ 3.49
CDC42EP5-201ENST00000301200 PRDM2Q13029 1718 aa36.82■■■■□ 3.48
CDC42EP5-201ENST00000301200 WDR62O43379 1518 aa36.75■■■■□ 3.47
CDC42EP5-201ENST00000301200 URB2Q14146 1524 aaKnown RBP36.5■■■■□ 3.43
CDC42EP5-201ENST00000301200 SUPT5HO00267 1087 aaKnown RBP36.5■■■■□ 3.43
CDC42EP5-201ENST00000301200 DNAJC5Q9H3Z4 198 aa36.37■■■■□ 3.41
CDC42EP5-201ENST00000301200 TOPBP1Q92547 1522 aa36.25■■■■□ 3.39
CDC42EP5-201ENST00000301200 ABCC8Q09428 1581 aa36.25■■■■□ 3.39
CDC42EP5-201ENST00000301200 DNMBPQ6XZF7 1577 aa36.21■■■■□ 3.39
CDC42EP5-201ENST00000301200 IFT140Q96RY7 1462 aa36.1■■■■□ 3.37
CDC42EP5-201ENST00000301200 ZNF608Q9ULD9 1512 aaPredicted RBP35.93■■■■□ 3.34
CDC42EP5-201ENST00000301200 POLA1P09884 1462 aaPredicted RBP35.92■■■■□ 3.34
CDC42EP5-201ENST00000301200 TARBP1Q13395 1621 aaKnown RBP35.87■■■■□ 3.33
CDC42EP5-201ENST00000301200 CUX1P39880 1505 aa35.87■■■■□ 3.33
CDC42EP5-201ENST00000301200 EIF4G3O43432 1585 aaKnown RBP35.83■■■■□ 3.33
CDC42EP5-201ENST00000301200 FGD5Q6ZNL6 1462 aa35.8■■■■□ 3.32
CDC42EP5-201ENST00000301200 SOGA1O94964 1423 aa35.75■■■■□ 3.31
CDC42EP5-201ENST00000301200 RAD54L2Q9Y4B4 1467 aa35.75■■■■□ 3.31
CDC42EP5-201ENST00000301200 AQRO60306 1485 aaKnown RBP eCLIP35.68■■■■□ 3.3
CDC42EP5-201ENST00000301200 OSCARQ8IYS5 282 aa35.64■■■■□ 3.3
CDC42EP5-201ENST00000301200 WDR97A6NE52 1622 aa35.63■■■■□ 3.29
CDC42EP5-201ENST00000301200 TDRD9Q8NDG6 1382 aaKnown RBP35.57■■■■□ 3.28
CDC42EP5-201ENST00000301200 WRNQ14191 1432 aaPredicted RBP eCLIP35.54■■■■□ 3.28
CDC42EP5-201ENST00000301200 BIVM-ERCC5R4GMW8 1640 aa35.53■■■■□ 3.28
CDC42EP5-201ENST00000301200 TOP2BQ02880 1626 aa35.51■■■■□ 3.28
CDC42EP5-201ENST00000301200 SYNJ1O43426 1573 aa35.48■■■■□ 3.27
CDC42EP5-201ENST00000301200 CHD1O14646 1710 aa35.46■■■■□ 3.27
CDC42EP5-201ENST00000301200 ABCA10Q8WWZ4 1543 aa35.44■■■■□ 3.26
CDC42EP5-201ENST00000301200 GRIN2BQ13224 1484 aa35.4■■■■□ 3.26
CDC42EP5-201ENST00000301200 SNAPC4Q5SXM2 1469 aa35.39■■■■□ 3.26
CDC42EP5-201ENST00000301200 PBRM1Q86U86 1689 aa35.37■■■■□ 3.25
CDC42EP5-201ENST00000301200 GAPVD1Q14C86 1478 aa35.36■■■■□ 3.25
CDC42EP5-201ENST00000301200 ABCA5Q8WWZ7 1642 aa35.35■■■■□ 3.25
CDC42EP5-201ENST00000301200 MAGI1Q96QZ7 1491 aaPredicted RBP35.35■■■■□ 3.25
CDC42EP5-201ENST00000301200 FBLN2P98095 1184 aa35.34■■■■□ 3.25
CDC42EP5-201ENST00000301200 CHMP7Q8WUX9 453 aaPredicted RBP35.2■■■■□ 3.23
CDC42EP5-201ENST00000301200 SYNJ2O15056 1496 aa35.2■■■■□ 3.23
CDC42EP5-201ENST00000301200 RIMBP3CA6NJZ7 1639 aa35.14■■■■□ 3.22
CDC42EP5-201ENST00000301200 RIMBP3BA6NNM3 1639 aa35.14■■■■□ 3.22
CDC42EP5-201ENST00000301200 RIMBP3Q9UFD9 1639 aa35.14■■■■□ 3.22
CDC42EP5-201ENST00000301200 TRIM41Q8WV44 630 aa35.11■■■■□ 3.21
CDC42EP5-201ENST00000301200 ARHGEF11O15085 1522 aa35.09■■■■□ 3.21
CDC42EP5-201ENST00000301200 ADAMTS12P58397 1594 aa35.04■■■■□ 3.2
CDC42EP5-201ENST00000301200 ERICH3Q5RHP9 1530 aa35.03■■■■□ 3.2
CDC42EP5-201ENST00000301200 CLASP1Q7Z460 1538 aa35.01■■■■□ 3.2
CDC42EP5-201ENST00000301200 FHAD1B1AJZ9 1412 aa34.94■■■■□ 3.18
CDC42EP5-201ENST00000301200 GRIN2AQ12879 1464 aa34.94■■■■□ 3.18
CDC42EP5-201ENST00000301200 KIF27Q86VH2 1401 aa34.83■■■■□ 3.17
CDC42EP5-201ENST00000301200 NUP160Q12769 1436 aa34.78■■■■□ 3.16
CDC42EP5-201ENST00000301200 ARAP1Q96P48 1450 aa34.78■■■■□ 3.16
CDC42EP5-201ENST00000301200 CEP170Q5SW79 1584 aa34.77■■■■□ 3.16
CDC42EP5-201ENST00000301200 CYB5RLQ6IPT4 315 aa34.74■■■■□ 3.15
CDC42EP5-201ENST00000301200 CUL7Q14999 1698 aa34.7■■■■□ 3.15
CDC42EP5-201ENST00000301200 IGF1RP08069 1367 aa34.66■■■■□ 3.14
CDC42EP5-201ENST00000301200 SHROOM2Q13796 1616 aa34.57■■■■□ 3.12
CDC42EP5-201ENST00000301200 RUSC2Q8N2Y8 1516 aa34.52■■■■□ 3.12
CDC42EP5-201ENST00000301200 CARMIL1Q5VZK9 1371 aa34.49■■■■□ 3.11
CDC42EP5-201ENST00000301200 ERCC6L2Q5T890 1561 aa34.49■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms