RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 NISCHQ9Y2I1 1504 aa25.07■■□□□ 1.6
PCDHB4-201ENST00000194152 DCAF8L2P0C7V8 631 aa23.56■■□□□ 1.36
PCDHB4-201ENST00000194152 SHROOM4Q9ULL8 1493 aa23.11■■□□□ 1.29
PCDHB4-201ENST00000194152 SUPT5HO00267 1087 aaKnown RBP22.78■■□□□ 1.24
PCDHB4-201ENST00000194152 EHMT2Q96KQ7 1210 aa21.82■■□□□ 1.08
PCDHB4-201ENST00000194152 FAM9AQ8IZU1 332 aaPredicted RBP21.37■■□□□ 1.01
PCDHB4-201ENST00000194152 ABCC9O60706 1549 aa21.17■□□□□ 0.98
PCDHB4-201ENST00000194152 CHIC1Q5VXU3 224 aa21.02■□□□□ 0.96
PCDHB4-201ENST00000194152 LOC105371045A0A1W2PR82 267 aa21.01■□□□□ 0.95
PCDHB4-201ENST00000194152 PCGF6Q9BYE7 350 aa20.96■□□□□ 0.95
PCDHB4-201ENST00000194152 TTBK1Q5TCY1 1321 aaPredicted RBP20.92■□□□□ 0.94
PCDHB4-201ENST00000194152 ZCCHC6Q5VYS8 1495 aaKnown RBP20.92■□□□□ 0.94
PCDHB4-201ENST00000194152 TRIM41Q8WV44 630 aa20.83■□□□□ 0.93
PCDHB4-201ENST00000194152 HRCP23327 699 aa20.83■□□□□ 0.92
PCDHB4-201ENST00000194152 PPARGC1BQ86YN6 1023 aaKnown RBP20.82■□□□□ 0.92
PCDHB4-201ENST00000194152 PABPN1Q86U42 306 aaKnown RBP eCLIP20.79■□□□□ 0.92
PCDHB4-201ENST00000194152 RANGAP1P46060 587 aaPredicted RBP20.68■□□□□ 0.9
PCDHB4-201ENST00000194152 PELP1Q8IZL8 1130 aaKnown RBP20.68■□□□□ 0.9
PCDHB4-201ENST00000194152 CCDC180Q9P1Z9 1646 aa20.61■□□□□ 0.89
PCDHB4-201ENST00000194152 SCRIBQ14160 1630 aa20.56■□□□□ 0.88
PCDHB4-201ENST00000194152 MYO15BQ96JP2 1530 aa20.37■□□□□ 0.85
PCDHB4-201ENST00000194152 UBTFP17480 764 aaKnown RBP20.24■□□□□ 0.83
PCDHB4-201ENST00000194152 CECR2Q9BXF3 1484 aa20.07■□□□□ 0.8
PCDHB4-201ENST00000194152 RSF1Q96T23 1441 aaPredicted RBP20.06■□□□□ 0.8
PCDHB4-201ENST00000194152 SCAF1Q9H7N4 1312 aaKnown RBP19.99■□□□□ 0.79
PCDHB4-201ENST00000194152 MYT1Q01538 1121 aa19.95■□□□□ 0.78
PCDHB4-201ENST00000194152 TRIM26Q12899 539 aaPredicted RBP19.95■□□□□ 0.78
PCDHB4-201ENST00000194152 ATP1B4Q9UN42 357 aaPredicted RBP19.87■□□□□ 0.77
PCDHB4-201ENST00000194152 CCER1Q8TC90 406 aaPredicted RBP19.86■□□□□ 0.77
PCDHB4-201ENST00000194152 APLP2Q06481 763 aa19.86■□□□□ 0.77
PCDHB4-201ENST00000194152 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.81■□□□□ 0.76
PCDHB4-201ENST00000194152 DCAF1Q9Y4B6 1507 aa19.78■□□□□ 0.76
PCDHB4-201ENST00000194152 MROH2BQ7Z745 1585 aa19.73■□□□□ 0.75
PCDHB4-201ENST00000194152 HNRNPUL2Q1KMD3 747 aaKnown RBP19.72■□□□□ 0.75
PCDHB4-201ENST00000194152 RB1CC1Q8TDY2 1594 aa19.72■□□□□ 0.75
PCDHB4-201ENST00000194152 ITGAEP38570 1179 aa19.67■□□□□ 0.74
PCDHB4-201ENST00000194152 NACADO15069 1562 aa19.64■□□□□ 0.73
PCDHB4-201ENST00000194152 GTF3C3Q9Y5Q9 886 aa19.58■□□□□ 0.72
PCDHB4-201ENST00000194152 CSRNP3Q8WYN3 585 aa19.55■□□□□ 0.72
PCDHB4-201ENST00000194152 ZEB1P37275 1124 aaPredicted RBP19.54■□□□□ 0.72
PCDHB4-201ENST00000194152 WIZO95785 1651 aa19.52■□□□□ 0.72
PCDHB4-201ENST00000194152 CENPBP07199 599 aaPredicted RBP19.49■□□□□ 0.71
PCDHB4-201ENST00000194152 NEUROD1Q13562 356 aa19.45■□□□□ 0.7
PCDHB4-201ENST00000194152 YTHDC1Q96MU7 727 aaKnown RBP19.45■□□□□ 0.7
PCDHB4-201ENST00000194152 P3H3Q8IVL6 736 aa19.44■□□□□ 0.7
PCDHB4-201ENST00000194152 ACIN1Q9UKV3 1341 aaKnown RBP19.44■□□□□ 0.7
PCDHB4-201ENST00000194152 ABCC8Q09428 1581 aa19.4■□□□□ 0.7
PCDHB4-201ENST00000194152 SOGA1O94964 1423 aa19.34■□□□□ 0.69
PCDHB4-201ENST00000194152 CCDC88BA6NC98 1476 aa19.31■□□□□ 0.68
PCDHB4-201ENST00000194152 BAZ1AQ9NRL2 1556 aaPredicted RBP19.3■□□□□ 0.68
PCDHB4-201ENST00000194152 ARID3CA6NKF2 412 aa19.28■□□□□ 0.68
PCDHB4-201ENST00000194152 RUSC2Q8N2Y8 1516 aa19.17■□□□□ 0.66
PCDHB4-201ENST00000194152 BAZ1BQ9UIG0 1483 aaKnown RBP19.17■□□□□ 0.66
PCDHB4-201ENST00000194152 WRNQ14191 1432 aaPredicted RBP eCLIP19.15■□□□□ 0.66
PCDHB4-201ENST00000194152 DIEXFQ68CQ4 756 aaKnown RBP19.14■□□□□ 0.66
PCDHB4-201ENST00000194152 FAM50AQ14320 339 aaKnown RBP19.1■□□□□ 0.65
PCDHB4-201ENST00000194152 CEP162Q5TB80 1403 aa19.09■□□□□ 0.65
PCDHB4-201ENST00000194152 FBLN2P98095 1184 aa19.03■□□□□ 0.64
PCDHB4-201ENST00000194152 SMARCA4P51532 1647 aa19.01■□□□□ 0.63
PCDHB4-201ENST00000194152 TOP2AP11388 1531 aaKnown RBP18.95■□□□□ 0.62
PCDHB4-201ENST00000194152 CLIP1P30622 1438 aa18.94■□□□□ 0.62
PCDHB4-201ENST00000194152 CNGB1Q14028 1251 aaPredicted RBP18.93■□□□□ 0.62
PCDHB4-201ENST00000194152 ATAD2BQ9ULI0 1458 aa18.92■□□□□ 0.62
PCDHB4-201ENST00000194152 SMARCA2P51531 1590 aa18.86■□□□□ 0.61
PCDHB4-201ENST00000194152 BCL11AQ9H165 835 aa18.84■□□□□ 0.61
PCDHB4-201ENST00000194152 DNAJC5BQ9UF47 199 aa18.84■□□□□ 0.61
PCDHB4-201ENST00000194152 TNIKQ9UKE5 1360 aa18.83■□□□□ 0.6
PCDHB4-201ENST00000194152 GOLGA3Q08378 1498 aa18.82■□□□□ 0.6
PCDHB4-201ENST00000194152 KANK4Q5T7N3 995 aaPredicted RBP18.8■□□□□ 0.6
PCDHB4-201ENST00000194152 BICRAQ9NZM4 1560 aa18.73■□□□□ 0.59
PCDHB4-201ENST00000194152 RAPGEF2Q9Y4G8 1499 aa18.73■□□□□ 0.59
PCDHB4-201ENST00000194152 HIRIP3Q9BW71 556 aaPredicted RBP18.73■□□□□ 0.59
PCDHB4-201ENST00000194152 CHIC2Q9UKJ5 165 aa18.69■□□□□ 0.58
PCDHB4-201ENST00000194152 POLR3GLQ9BT43 218 aa18.68■□□□□ 0.58
PCDHB4-201ENST00000194152 CEP164Q9UPV0 1460 aa18.68■□□□□ 0.58
PCDHB4-201ENST00000194152 CUX2O14529 1486 aa18.67■□□□□ 0.58
PCDHB4-201ENST00000194152 TRIM52Q96A61 297 aa18.67■□□□□ 0.58
PCDHB4-201ENST00000194152 ZNF316A6NFI3 1004 aaPredicted RBP18.66■□□□□ 0.58
PCDHB4-201ENST00000194152 EEA1Q15075 1411 aa18.65■□□□□ 0.58
PCDHB4-201ENST00000194152 KIF27Q86VH2 1401 aa18.64■□□□□ 0.57
PCDHB4-201ENST00000194152 UNC13AQ9UPW8 1703 aa18.63■□□□□ 0.57
PCDHB4-201ENST00000194152 TDRD9Q8NDG6 1382 aaKnown RBP18.63■□□□□ 0.57
PCDHB4-201ENST00000194152 ZNF777Q9ULD5 760 aaPredicted RBP18.6■□□□□ 0.57
PCDHB4-201ENST00000194152 BCANQ96GW7 911 aa18.56■□□□□ 0.56
PCDHB4-201ENST00000194152 SYNJ1O43426 1573 aa18.56■□□□□ 0.56
PCDHB4-201ENST00000194152 CARMIL1Q5VZK9 1371 aa18.54■□□□□ 0.56
PCDHB4-201ENST00000194152 MIER1Q8N108 512 aa18.54■□□□□ 0.56
PCDHB4-201ENST00000194152 ANP32EQ9BTT0 268 aa18.54■□□□□ 0.56
PCDHB4-201ENST00000194152 EIF4G1Q04637 1599 aaKnown RBP18.53■□□□□ 0.56
PCDHB4-201ENST00000194152 ZNF326Q5BKZ1 582 aaKnown RBP18.52■□□□□ 0.55
PCDHB4-201ENST00000194152 CADPSQ9ULU8 1353 aa18.51■□□□□ 0.55
PCDHB4-201ENST00000194152 SIN3AQ96ST3 1273 aa18.5■□□□□ 0.55
PCDHB4-201ENST00000194152 RRP7BPQ9NSQ0 103 aa18.48■□□□□ 0.55
PCDHB4-201ENST00000194152 MYT1LQ9UL68 1186 aa18.48■□□□□ 0.55
PCDHB4-201ENST00000194152 NESP48681 1621 aa18.48■□□□□ 0.55
PCDHB4-201ENST00000194152 VPS8Q8N3P4 1428 aa18.46■□□□□ 0.55
PCDHB4-201ENST00000194152 RAD54L2Q9Y4B4 1467 aa18.43■□□□□ 0.54
PCDHB4-201ENST00000194152 ERICH6Q7L0X2 663 aa18.41■□□□□ 0.54
PCDHB4-201ENST00000194152 DDX10Q13206 875 aaKnown RBP18.4■□□□□ 0.54
PCDHB4-201ENST00000194152 MTUS2Q5JR59 1369 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms