RNA–Protein interactions for RNA: ENST00000389385.8

RPH3A-201, Transcript of rabphilin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RPH3A, Length 4,679 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-201ENST00000389385 NISCHQ9Y2I1 1504 aa19.88■□□□□ 0.77
RPH3A-201ENST00000389385 DCAF8L2P0C7V8 631 aa19.7■□□□□ 0.74
RPH3A-201ENST00000389385 SUPT5HO00267 1087 aaKnown RBP18.7■□□□□ 0.58
RPH3A-201ENST00000389385 SHROOM4Q9ULL8 1493 aa18.6■□□□□ 0.57
RPH3A-201ENST00000389385 PELP1Q8IZL8 1130 aaKnown RBP18.29■□□□□ 0.52
RPH3A-201ENST00000389385 PCGF6Q9BYE7 350 aa17.91■□□□□ 0.46
RPH3A-201ENST00000389385 EHMT2Q96KQ7 1210 aa17.85■□□□□ 0.45
RPH3A-201ENST00000389385 CENPBP07199 599 aaPredicted RBP17.76■□□□□ 0.43
RPH3A-201ENST00000389385 MYT1Q01538 1121 aa17.76■□□□□ 0.43
RPH3A-201ENST00000389385 ZEB1P37275 1124 aaPredicted RBP17.7■□□□□ 0.42
RPH3A-201ENST00000389385 APLP2Q06481 763 aa17.6■□□□□ 0.41
RPH3A-201ENST00000389385 FAM9AQ8IZU1 332 aaPredicted RBP17.56■□□□□ 0.4
RPH3A-201ENST00000389385 ERICH6Q7L0X2 663 aa17.49■□□□□ 0.39
RPH3A-201ENST00000389385 CCER1Q8TC90 406 aaPredicted RBP17.42■□□□□ 0.38
RPH3A-201ENST00000389385 TTBK1Q5TCY1 1321 aaPredicted RBP17.36■□□□□ 0.37
RPH3A-201ENST00000389385 TRIM41Q8WV44 630 aa17.36■□□□□ 0.37
RPH3A-201ENST00000389385 HRCP23327 699 aa17.29■□□□□ 0.36
RPH3A-201ENST00000389385 ABCC9O60706 1549 aa17.19■□□□□ 0.34
RPH3A-201ENST00000389385 YTHDC1Q96MU7 727 aaKnown RBP17.18■□□□□ 0.34
RPH3A-201ENST00000389385 NEFLP07196 543 aa17.17■□□□□ 0.34
RPH3A-201ENST00000389385 RANGAP1P46060 587 aaPredicted RBP17.12■□□□□ 0.33
RPH3A-201ENST00000389385 TRIM26Q12899 539 aaPredicted RBP17.1■□□□□ 0.33
RPH3A-201ENST00000389385 UBTFP17480 764 aaKnown RBP17.04■□□□□ 0.32
RPH3A-201ENST00000389385 ATP1B4Q9UN42 357 aaPredicted RBP16.89■□□□□ 0.29
RPH3A-201ENST00000389385 CHIC1Q5VXU3 224 aa16.88■□□□□ 0.29
RPH3A-201ENST00000389385 PPARGC1BQ86YN6 1023 aaKnown RBP16.85■□□□□ 0.29
RPH3A-201ENST00000389385 PABPN1Q86U42 306 aaKnown RBP eCLIP16.78■□□□□ 0.28
RPH3A-201ENST00000389385 LOC105371045A0A1W2PR82 267 aa16.73■□□□□ 0.27
RPH3A-201ENST00000389385 DIEXFQ68CQ4 756 aaKnown RBP16.64■□□□□ 0.25
RPH3A-201ENST00000389385 DAXXQ9UER7 740 aaPredicted RBP16.59■□□□□ 0.25
RPH3A-201ENST00000389385 GTF3C3Q9Y5Q9 886 aa16.52■□□□□ 0.24
RPH3A-201ENST00000389385 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.5■□□□□ 0.23
RPH3A-201ENST00000389385 HNRNPUL2Q1KMD3 747 aaKnown RBP16.49■□□□□ 0.23
RPH3A-201ENST00000389385 ZCCHC6Q5VYS8 1495 aaKnown RBP16.49■□□□□ 0.23
RPH3A-201ENST00000389385 RTL5Q5HYW3 569 aaPredicted RBP16.47■□□□□ 0.23
RPH3A-201ENST00000389385 ITGAEP38570 1179 aa16.42■□□□□ 0.22
RPH3A-201ENST00000389385 CCDC180Q9P1Z9 1646 aa16.38■□□□□ 0.21
RPH3A-201ENST00000389385 ACIN1Q9UKV3 1341 aaKnown RBP16.33■□□□□ 0.2
RPH3A-201ENST00000389385 POLR3GLQ9BT43 218 aa16.31■□□□□ 0.2
RPH3A-201ENST00000389385 SCRIBQ14160 1630 aa16.3■□□□□ 0.2
RPH3A-201ENST00000389385 BCANQ96GW7 911 aa16.24■□□□□ 0.19
RPH3A-201ENST00000389385 ZNF316A6NFI3 1004 aaPredicted RBP16.22■□□□□ 0.19
RPH3A-201ENST00000389385 CNGB1Q14028 1251 aaPredicted RBP16.19■□□□□ 0.18
RPH3A-201ENST00000389385 CDK11AQ9UQ88 783 aaPredicted RBP16.17■□□□□ 0.18
RPH3A-201ENST00000389385 MYT1LQ9UL68 1186 aa16.14■□□□□ 0.17
RPH3A-201ENST00000389385 CLSPNQ9HAW4 1339 aa16.12■□□□□ 0.17
RPH3A-201ENST00000389385 CSRNP3Q8WYN3 585 aa16.1■□□□□ 0.17
RPH3A-201ENST00000389385 ANP32CO43423 234 aa16.06■□□□□ 0.16
RPH3A-201ENST00000389385 FAM50AQ14320 339 aaKnown RBP16.04■□□□□ 0.16
RPH3A-201ENST00000389385 FBLN2P98095 1184 aa15.99■□□□□ 0.15
RPH3A-201ENST00000389385 NEUROD1Q13562 356 aa15.97■□□□□ 0.15
RPH3A-201ENST00000389385 RB1CC1Q8TDY2 1594 aa15.97■□□□□ 0.15
RPH3A-201ENST00000389385 P3H3Q8IVL6 736 aa15.92■□□□□ 0.14
RPH3A-201ENST00000389385 ANP32AP39687 249 aaKnown RBP15.9■□□□□ 0.14
RPH3A-201ENST00000389385 SCAF1Q9H7N4 1312 aaKnown RBP15.9■□□□□ 0.14
RPH3A-201ENST00000389385 NACADO15069 1562 aa15.89■□□□□ 0.13
RPH3A-201ENST00000389385 RSF1Q96T23 1441 aaPredicted RBP15.88■□□□□ 0.13
RPH3A-201ENST00000389385 TRIM52Q96A61 297 aa15.86■□□□□ 0.13
RPH3A-201ENST00000389385 FKBP8Q14318 412 aa15.83■□□□□ 0.12
RPH3A-201ENST00000389385 DCAF1Q9Y4B6 1507 aa15.81■□□□□ 0.12
RPH3A-201ENST00000389385 EIF5BO60841 1220 aaKnown RBP15.8■□□□□ 0.12
RPH3A-201ENST00000389385 ARID3CA6NKF2 412 aa15.79■□□□□ 0.12
RPH3A-201ENST00000389385 SLC4A1APQ9BWU0 796 aaKnown RBP15.79■□□□□ 0.12
RPH3A-201ENST00000389385 NPM2Q86SE8 214 aaKnown RBP15.71■□□□□ 0.1
RPH3A-201ENST00000389385 ZNF326Q5BKZ1 582 aaKnown RBP15.68■□□□□ 0.1
RPH3A-201ENST00000389385 GLIPR1L2Q4G1C9 344 aa15.64■□□□□ 0.09
RPH3A-201ENST00000389385 ZBTB47Q9UFB7 747 aaPredicted RBP15.64■□□□□ 0.09
RPH3A-201ENST00000389385 HNRNPUQ00839 825 aaKnown RBP eCLIP15.63■□□□□ 0.09
RPH3A-201ENST00000389385 CECR2Q9BXF3 1484 aa15.63■□□□□ 0.09
RPH3A-201ENST00000389385 BAZ1BQ9UIG0 1483 aaKnown RBP15.62■□□□□ 0.09
RPH3A-201ENST00000389385 CANXP27824 592 aaKnown RBP15.61■□□□□ 0.09
RPH3A-201ENST00000389385 ZNF777Q9ULD5 760 aaPredicted RBP15.61■□□□□ 0.09
RPH3A-201ENST00000389385 DDX10Q13206 875 aaKnown RBP15.59■□□□□ 0.09
RPH3A-201ENST00000389385 MIER1Q8N108 512 aa15.59■□□□□ 0.09
RPH3A-201ENST00000389385 BAZ1AQ9NRL2 1556 aaPredicted RBP15.58■□□□□ 0.09
RPH3A-201ENST00000389385 NBR1Q14596 966 aa15.57■□□□□ 0.08
RPH3A-201ENST00000389385 MYO15BQ96JP2 1530 aa15.57■□□□□ 0.08
RPH3A-201ENST00000389385 ERCC6Q03468 1493 aa15.57■□□□□ 0.08
RPH3A-201ENST00000389385 WRNQ14191 1432 aaPredicted RBP eCLIP15.56■□□□□ 0.08
RPH3A-201ENST00000389385 ANP32EQ9BTT0 268 aa15.54■□□□□ 0.08
RPH3A-201ENST00000389385 ANP32BQ92688 251 aaKnown RBP15.53■□□□□ 0.08
RPH3A-201ENST00000389385 CLIP1P30622 1438 aa15.53■□□□□ 0.08
RPH3A-201ENST00000389385 EEA1Q15075 1411 aa15.52■□□□□ 0.08
RPH3A-201ENST00000389385 CCDC136Q96JN2 1154 aa15.52■□□□□ 0.07
RPH3A-201ENST00000389385 TONSLQ96HA7 1378 aa15.49■□□□□ 0.07
RPH3A-201ENST00000389385 FAM9BQ8IZU0 186 aa15.48■□□□□ 0.07
RPH3A-201ENST00000389385 CHMP7Q8WUX9 453 aaPredicted RBP15.47■□□□□ 0.07
RPH3A-201ENST00000389385 UPF2Q9HAU5 1272 aaKnown RBP15.46■□□□□ 0.06
RPH3A-201ENST00000389385 GOLGA3Q08378 1498 aa15.45■□□□□ 0.06
RPH3A-201ENST00000389385 NPM1P06748 294 aaKnown RBP eCLIP15.44■□□□□ 0.06
RPH3A-201ENST00000389385 CEP162Q5TB80 1403 aa15.43■□□□□ 0.06
RPH3A-201ENST00000389385 BCL11AQ9H165 835 aa15.42■□□□□ 0.06
RPH3A-201ENST00000389385 MROH2BQ7Z745 1585 aa15.41■□□□□ 0.06
RPH3A-201ENST00000389385 MTUS2Q5JR59 1369 aa15.41■□□□□ 0.06
RPH3A-201ENST00000389385 HSP90AA1P07900 732 aaKnown RBP15.41■□□□□ 0.06
RPH3A-201ENST00000389385 KIF27Q86VH2 1401 aa15.4■□□□□ 0.06
RPH3A-201ENST00000389385 CHIC2Q9UKJ5 165 aa15.4■□□□□ 0.06
RPH3A-201ENST00000389385 NEFMP07197 916 aa15.38■□□□□ 0.05
RPH3A-201ENST00000389385 IRX6P78412 446 aaPredicted RBP15.37■□□□□ 0.05
RPH3A-201ENST00000389385 TRHP20396 242 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms