Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 AC004449.1-201ENST00000564240 433 ntBASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 LINC01115-203ENST00000606068 577 ntBASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 AL138828.2-201ENST00000615812 383 ntBASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 MIR6069-201ENST00000620069 79 ntBASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 AC093028.1-201ENST00000622998 982 ntBASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 Z97205.2-201ENST00000564697 1639 ntBASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 AC067930.6-201ENST00000623257 4947 ntBASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 SLED1-202ENST00000512051 380 ntBASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 TEX28P1-201ENST00000613479 1221 ntBASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 TEX28P2-201ENST00000617764 1221 ntBASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
UPF3BQ9BZI7 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 FO538757.1-201ENST00000623083 1397 ntBASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.54■□□□□ 0.56
UPF3BQ9BZI7 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPF3BQ9BZI7 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms