Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 CLUHP6-201ENST00000580789 941 ntBASIC12.66□□□□□ -0.38
ZNF48Q96MX3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.66□□□□□ -0.38
ZNF48Q96MX3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.66□□□□□ -0.38
ZNF48Q96MX3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF48Q96MX3 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.66□□□□□ -0.38
ZNF48Q96MX3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
ZNF48Q96MX3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF48Q96MX3 AC104581.4-201ENST00000623126 3052 ntBASIC12.66□□□□□ -0.38
ZNF48Q96MX3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
ZNF48Q96MX3 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
ZNF48Q96MX3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF48Q96MX3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF48Q96MX3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
ZNF48Q96MX3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF48Q96MX3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF48Q96MX3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF48Q96MX3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
ZNF48Q96MX3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF48Q96MX3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF48Q96MX3 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF48Q96MX3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF48Q96MX3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF48Q96MX3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF48Q96MX3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
ZNF48Q96MX3 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
ZNF48Q96MX3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
ZNF48Q96MX3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 AC018892.3-201ENST00000623986 2499 ntBASIC12.65□□□□□ -0.38
ZNF48Q96MX3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 RPL13AP25-201ENST00000484130 612 ntBASIC12.65□□□□□ -0.38
ZNF48Q96MX3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 AL583810.1-201ENST00000553344 1045 ntBASIC12.65□□□□□ -0.38
ZNF48Q96MX3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 MIR4538-201ENST00000581377 78 ntBASIC12.65□□□□□ -0.38
ZNF48Q96MX3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 MSTO2P-201ENST00000314835 1709 ntBASIC12.65□□□□□ -0.38
ZNF48Q96MX3 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF48Q96MX3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
ZNF48Q96MX3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms