Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.11□□□□□ -1.434e-8■□□□□ 10.4
RPS3P23396 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.54■□□□□ 0.562e-13■□□□□ 10.4
RPS3P23396 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.382e-13■□□□□ 10.4
RPS3P23396 SREBF2-202ENST00000424354 5699 ntTSL 1 (best)13.42□□□□□ -0.262e-13■□□□□ 10.4
RPS3P23396 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.485e-7■□□□□ 10.4
RPS3P23396 VIM-209ENST00000544301 2135 ntAPPRIS P1 TSL 1 (best)17.79■□□□□ 0.445e-7■□□□□ 10.4
RPS3P23396 VIM-206ENST00000487938 2272 ntTSL 517.59■□□□□ 0.415e-7■□□□□ 10.4
RPS3P23396 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.3■□□□□ 0.681e-13■□□□□ 10.4
RPS3P23396 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.011e-13■□□□□ 10.4
RPS3P23396 RPS23-204ENST00000507980 836 ntTSL 2 BASIC13.37□□□□□ -0.271e-13■□□□□ 10.4
RPS3P23396 RPS23-207ENST00000511844 530 ntTSL 2 BASIC13.27□□□□□ -0.291e-13■□□□□ 10.4
RPS3P23396 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC11.72□□□□□ -0.531e-13■□□□□ 10.4
RPS3P23396 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.96□□□□□ -1.31e-13■□□□□ 10.4
RPS3P23396 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.014e-7■□□□□ 10.4
RPS3P23396 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.78□□□□□ -0.24e-7■□□□□ 10.4
RPS3P23396 VIM-203ENST00000469543 2666 ntTSL 218.68■□□□□ 0.586e-7■□□□□ 10.4
RPS3P23396 RPL37A-207ENST00000478153 2082 ntTSL 1 (best)21.52■■□□□ 1.046e-9■□□□□ 10.4
RPS3P23396 RPL37A-201ENST00000359681 742 ntTSL 1 (best)17.29■□□□□ 0.366e-9■□□□□ 10.4
RPS3P23396 RPL37A-202ENST00000420712 385 ntTSL 59.4□□□□□ -0.96e-9■□□□□ 10.4
RPS3P23396 RPL37A-208ENST00000487233 2225 ntTSL 28.9□□□□□ -0.986e-9■□□□□ 10.4
RPS3P23396 RPL37A-209ENST00000490649 1701 ntTSL 1 (best)8.4□□□□□ -1.066e-9■□□□□ 10.4
RPS3P23396 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.296e-9■□□□□ 10.4
RPS3P23396 VIL1-202ENST00000392114 1968 ntTSL 2 BASIC12.02□□□□□ -0.494e-9■□□□□ 10.4
RPS3P23396 VIL1-201ENST00000248444 6531 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.884e-9■□□□□ 10.4
RPS3P23396 CALM2-206ENST00000482532 1891 ntTSL 210.94□□□□□ -0.661e-8■□□□□ 10.4
RPS3P23396 FKBP10-204ENST00000464180 1129 ntTSL 219.66■□□□□ 0.745e-9■□□□□ 10.4
RPS3P23396 FKBP10-207ENST00000490938 837 ntTSL 215.22■□□□□ 0.035e-9■□□□□ 10.4
RPS3P23396 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.391e-10■□□□□ 10.4
RPS3P23396 RELN-204ENST00000429186 891 ntTSL 54.57□□□□□ -1.683e-8■□□□□ 10.3
RPS3P23396 PFKL-209ENST00000495274 951 ntTSL 216.14■□□□□ 0.175e-7■□□□□ 10.3
RPS3P23396 NMU-204ENST00000509371 283 ntTSL 1 (best)2.15□□□□□ -2.073e-8■□□□□ 10.3
RPS3P23396 SREBF1-220ENST00000581707 695 ntTSL 218.9■□□□□ 0.626e-11■□□□□ 10.3
RPS3P23396 LDLR-206ENST00000557958 1881 ntTSL 216.71■□□□□ 0.276e-10■□□□□ 10.3
RPS3P23396 LAMA5-203ENST00000370691 3160 ntTSL 1 (best)13.29□□□□□ -0.288e-7■□□□□ 10.3
RPS3P23396 CYP2W1-203ENST00000415893 890 ntTSL 317.58■□□□□ 0.43e-8■□□□□ 10.3
RPS3P23396 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.363e-8■□□□□ 10.3
RPS3P23396 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.31■□□□□ 0.363e-8■□□□□ 10.3
RPS3P23396 ARPC1B-218ENST00000484375 785 ntTSL 322.2■■□□□ 1.142e-9■□□□□ 10.3
RPS3P23396 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.549e-7■□□□□ 10.3
RPS3P23396 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.442e-9■□□□□ 10.3
RPS3P23396 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.362e-9■□□□□ 10.3
RPS3P23396 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.65■□□□□ 0.262e-9■□□□□ 10.3
RPS3P23396 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.152e-9■□□□□ 10.3
RPS3P23396 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.032e-9■□□□□ 10.3
RPS3P23396 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.012e-9■□□□□ 10.3
RPS3P23396 ARPC1B-217ENST00000481997 945 ntTSL 214.81□□□□□ -0.042e-9■□□□□ 10.3
RPS3P23396 ARPC1B-210ENST00000445924 727 ntTSL 513.88□□□□□ -0.192e-9■□□□□ 10.3
RPS3P23396 ARPC1B-208ENST00000432343 839 ntTSL 513.45□□□□□ -0.262e-9■□□□□ 10.3
RPS3P23396 CCND1-204ENST00000539241 920 ntTSL 213.38□□□□□ -0.271e-11■□□□□ 10.3
RPS3P23396 CCND1-202ENST00000535993 568 ntTSL 211.69□□□□□ -0.541e-11■□□□□ 10.3
RPS3P23396 RPL27A-208ENST00000530913 805 ntTSL 2 BASIC11.25□□□□□ -0.613e-22■□□□□ 10.3
RPS3P23396 PSME1-203ENST00000470718 476 ntTSL 33.23□□□□□ -1.892e-9■□□□□ 10.3
RPS3P23396 ERGIC3-214ENST00000482338 598 ntTSL 28.72□□□□□ -1.011e-12■□□□□ 10.3
RPS3P23396 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.93■□□□□ 0.463e-6■□□□□ 10.3
RPS3P23396 CLN3-247ENST00000636351 1292 ntTSL 517.39■□□□□ 0.373e-6■□□□□ 10.3
RPS3P23396 SLC26A6-211ENST00000431739 588 ntTSL 314.18□□□□□ -0.142e-8■□□□□ 10.3
RPS3P23396 SLC26A6-209ENST00000426599 555 ntTSL 413.75□□□□□ -0.212e-8■□□□□ 10.3
RPS3P23396 SLC26A6-218ENST00000482282 1029 ntTSL 513.71□□□□□ -0.212e-8■□□□□ 10.3
RPS3P23396 HMGN2-207ENST00000468388 320 ntTSL 36.76□□□□□ -1.333e-9■□□□□ 10.3
RPS3P23396 RPL10-211ENST00000467168 802 ntTSL 210.16□□□□□ -0.787e-17■□□□□ 10.3
RPS3P23396 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.112e-6■□□□□ 10.3
RPS3P23396 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.182e-6■□□□□ 10.3
RPS3P23396 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.232e-6■□□□□ 10.3
RPS3P23396 EIF3H-207ENST00000520289 855 ntTSL 20.62□□□□□ -2.319e-7■□□□□ 10.3
RPS3P23396 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.012e-7■□□□□ 10.3
RPS3P23396 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.52e-7■□□□□ 10.3
RPS3P23396 CARHSP1-204ENST00000562586 578 ntTSL 215.41■□□□□ 0.064e-19■□□□□ 10.3
RPS3P23396 CARHSP1-214ENST00000569572 578 ntTSL 313.25□□□□□ -0.294e-19■□□□□ 10.3
RPS3P23396 FASN-205ENST00000584610 857 ntTSL 218.32■□□□□ 0.524e-25■□□□□ 10.3
RPS3P23396 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.52■□□□□ 0.887e-13■□□□□ 10.3
RPS3P23396 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.46■□□□□ 0.237e-13■□□□□ 10.3
RPS3P23396 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.04□□□□□ -0.167e-13■□□□□ 10.3
RPS3P23396 SEC23A-210ENST00000555425 547 ntTSL 54.7□□□□□ -1.667e-13■□□□□ 10.3
RPS3P23396 HNRNPM-215ENST00000601645 832 ntTSL 313.91□□□□□ -0.181e-11■□□□□ 10.3
RPS3P23396 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.16■■□□□ 1.33e-6■□□□□ 10.3
RPS3P23396 GUCD1-201ENST00000398245 1593 ntTSL 523.14■■□□□ 1.33e-6■□□□□ 10.3
RPS3P23396 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.52■■□□□ 1.23e-6■□□□□ 10.3
RPS3P23396 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.12■□□□□ 0.173e-6■□□□□ 10.3
RPS3P23396 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.063e-6■□□□□ 10.3
RPS3P23396 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 03e-6■□□□□ 10.3
RPS3P23396 GUCD1-213ENST00000621833 3584 ntTSL 1 (best) BASIC11□□□□□ -0.653e-6■□□□□ 10.3
RPS3P23396 MLF2-208ENST00000541305 564 ntTSL 217.59■□□□□ 0.413e-6■□□□□ 10.3
RPS3P23396 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.082e-6■□□□□ 10.3
RPS3P23396 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.33■■□□□ 1.655e-10■□□□□ 10.3
RPS3P23396 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.365e-10■□□□□ 10.3
RPS3P23396 YWHAQ-205ENST00000474715 709 ntTSL 32.62□□□□□ -1.991e-7■□□□□ 10.3
RPS3P23396 LDLR-213ENST00000560502 509 ntTSL 213.56□□□□□ -0.248e-10■□□□□ 10.3
RPS3P23396 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC13.46□□□□□ -0.263e-6■□□□□ 10.3
RPS3P23396 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.471e-9■□□□□ 10.3
RPS3P23396 HLA-F-220ENST00000434407 884 ntBASIC17.98■□□□□ 0.471e-9■□□□□ 10.3
RPS3P23396 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.251e-9■□□□□ 10.3
RPS3P23396 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.63■□□□□ 0.251e-9■□□□□ 10.3
RPS3P23396 HLA-F-226ENST00000484704 1201 nt14.57□□□□□ -0.081e-9■□□□□ 10.3
RPS3P23396 HLA-F-223ENST00000465459 623 nt14.53□□□□□ -0.081e-9■□□□□ 10.3
RPS3P23396 HLA-F-229ENST00000489502 489 nt14.12□□□□□ -0.151e-9■□□□□ 10.3
RPS3P23396 HLA-F-224ENST00000475996 1505 nt12.62□□□□□ -0.391e-9■□□□□ 10.3
RPS3P23396 HLA-F-219ENST00000429294 796 nt12.48□□□□□ -0.411e-9■□□□□ 10.3
RPS3P23396 HLA-F-230ENST00000606273 579 nt11.63□□□□□ -0.551e-9■□□□□ 10.3
RPS3P23396 HLA-F-221ENST00000444621 495 nt10.77□□□□□ -0.691e-9■□□□□ 10.3
RPS3P23396 TSPAN3-206ENST00000559373 393 ntTSL 319.61■□□□□ 0.734e-13■□□□□ 10.3
Retrieved 100 of 24,271 protein–RNA pairs in 281.2 ms