RNA–Protein interactions for RNA: ENST00000432343.1

ARPC1B-208, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 839 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-208ENST00000432343 NISCHQ9Y2I1 1504 aa32.79■■■□□ 2.84
ARPC1B-208ENST00000432343 CCDC180Q9P1Z9 1646 aa29.07■■■□□ 2.24
ARPC1B-208ENST00000432343 ABCC9O60706 1549 aa28.24■■■□□ 2.11
ARPC1B-208ENST00000432343 DCAF8L2P0C7V8 631 aa27.42■■□□□ 1.98
ARPC1B-208ENST00000432343 ZCCHC6Q5VYS8 1495 aaKnown RBP27.37■■□□□ 1.97
ARPC1B-208ENST00000432343 RB1CC1Q8TDY2 1594 aa27.22■■□□□ 1.95
ARPC1B-208ENST00000432343 NACADO15069 1562 aa27.21■■□□□ 1.95
ARPC1B-208ENST00000432343 DCAF1Q9Y4B6 1507 aa27.06■■□□□ 1.92
ARPC1B-208ENST00000432343 MYO15BQ96JP2 1530 aa27.03■■□□□ 1.92
ARPC1B-208ENST00000432343 UNC13AQ9UPW8 1703 aa26.77■■□□□ 1.88
ARPC1B-208ENST00000432343 SCRIBQ14160 1630 aa26.66■■□□□ 1.86
ARPC1B-208ENST00000432343 PABPN1Q86U42 306 aaKnown RBP eCLIP26.43■■□□□ 1.82
ARPC1B-208ENST00000432343 BICRAQ9NZM4 1560 aa26.4■■□□□ 1.82
ARPC1B-208ENST00000432343 SHROOM4Q9ULL8 1493 aa26.24■■□□□ 1.79
ARPC1B-208ENST00000432343 EIF4G1Q04637 1599 aaKnown RBP25.68■■□□□ 1.7
ARPC1B-208ENST00000432343 DNAJC5BQ9UF47 199 aa25.61■■□□□ 1.69
ARPC1B-208ENST00000432343 CECR2Q9BXF3 1484 aa25.56■■□□□ 1.68
ARPC1B-208ENST00000432343 CC2D2AQ9P2K1 1620 aa25.55■■□□□ 1.68
ARPC1B-208ENST00000432343 SMARCA4P51532 1647 aa25.45■■□□□ 1.66
ARPC1B-208ENST00000432343 BAZ1AQ9NRL2 1556 aaPredicted RBP25.41■■□□□ 1.66
ARPC1B-208ENST00000432343 MROH2BQ7Z745 1585 aa25.33■■□□□ 1.65
ARPC1B-208ENST00000432343 ATAD2BQ9ULI0 1458 aa25.16■■□□□ 1.62
ARPC1B-208ENST00000432343 SMARCA2P51531 1590 aa25.16■■□□□ 1.62
ARPC1B-208ENST00000432343 WIZO95785 1651 aa25.15■■□□□ 1.62
ARPC1B-208ENST00000432343 PEG3Q9GZU2 1588 aa25.09■■□□□ 1.61
ARPC1B-208ENST00000432343 RSF1Q96T23 1441 aaPredicted RBP25.08■■□□□ 1.61
ARPC1B-208ENST00000432343 NCAPD3P42695 1498 aa25.05■■□□□ 1.6
ARPC1B-208ENST00000432343 BAZ1BQ9UIG0 1483 aaKnown RBP25.02■■□□□ 1.6
ARPC1B-208ENST00000432343 HMGXB3Q12766 1538 aa25.01■■□□□ 1.59
ARPC1B-208ENST00000432343 TOP2AP11388 1531 aaKnown RBP24.81■■□□□ 1.56
ARPC1B-208ENST00000432343 SUPT5HO00267 1087 aaKnown RBP24.79■■□□□ 1.56
ARPC1B-208ENST00000432343 NESP48681 1621 aa24.53■■□□□ 1.52
ARPC1B-208ENST00000432343 CCDC88BA6NC98 1476 aa24.51■■□□□ 1.51
ARPC1B-208ENST00000432343 LAMC3Q9Y6N6 1575 aa24.43■■□□□ 1.5
ARPC1B-208ENST00000432343 CADPSQ9ULU8 1353 aa24.37■■□□□ 1.49
ARPC1B-208ENST00000432343 KIF21AQ7Z4S6 1674 aa24.31■■□□□ 1.48
ARPC1B-208ENST00000432343 ERCC6Q03468 1493 aa24.31■■□□□ 1.48
ARPC1B-208ENST00000432343 PRDM2Q13029 1718 aa24.3■■□□□ 1.48
ARPC1B-208ENST00000432343 CFTRP13569 1480 aa24.28■■□□□ 1.48
ARPC1B-208ENST00000432343 PDS5BQ9NTI5 1447 aa24.22■■□□□ 1.47
ARPC1B-208ENST00000432343 FANCD2Q9BXW9 1451 aa24.16■■□□□ 1.46
ARPC1B-208ENST00000432343 CEP164Q9UPV0 1460 aa24.11■■□□□ 1.45
ARPC1B-208ENST00000432343 THOC2Q8NI27 1593 aaKnown RBP24.08■■□□□ 1.44
ARPC1B-208ENST00000432343 MRC2Q9UBG0 1479 aa24■■□□□ 1.43
ARPC1B-208ENST00000432343 URB2Q14146 1524 aaKnown RBP23.91■■□□□ 1.42
ARPC1B-208ENST00000432343 WDR62O43379 1518 aa23.89■■□□□ 1.42
ARPC1B-208ENST00000432343 CUX2O14529 1486 aa23.86■■□□□ 1.41
ARPC1B-208ENST00000432343 DNMBPQ6XZF7 1577 aa23.81■■□□□ 1.4
ARPC1B-208ENST00000432343 TOPBP1Q92547 1522 aa23.8■■□□□ 1.4
ARPC1B-208ENST00000432343 ABCC8Q09428 1581 aa23.8■■□□□ 1.4
ARPC1B-208ENST00000432343 CUX1P39880 1505 aa23.75■■□□□ 1.39
ARPC1B-208ENST00000432343 WRNQ14191 1432 aaPredicted RBP eCLIP23.67■■□□□ 1.38
ARPC1B-208ENST00000432343 SYNJ1O43426 1573 aa23.66■■□□□ 1.38
ARPC1B-208ENST00000432343 BIVM-ERCC5R4GMW8 1640 aa23.63■■□□□ 1.37
ARPC1B-208ENST00000432343 FGD5Q6ZNL6 1462 aa23.62■■□□□ 1.37
ARPC1B-208ENST00000432343 POLA1P09884 1462 aaPredicted RBP23.61■■□□□ 1.37
ARPC1B-208ENST00000432343 TOP2BQ02880 1626 aa23.6■■□□□ 1.37
ARPC1B-208ENST00000432343 RAD54L2Q9Y4B4 1467 aa23.56■■□□□ 1.36
ARPC1B-208ENST00000432343 IFT140Q96RY7 1462 aa23.55■■□□□ 1.36
ARPC1B-208ENST00000432343 TARBP1Q13395 1621 aaKnown RBP23.54■■□□□ 1.36
ARPC1B-208ENST00000432343 SOGA1O94964 1423 aa23.51■■□□□ 1.35
ARPC1B-208ENST00000432343 ZNF608Q9ULD9 1512 aaPredicted RBP23.49■■□□□ 1.35
ARPC1B-208ENST00000432343 WDR97A6NE52 1622 aa23.46■■□□□ 1.35
ARPC1B-208ENST00000432343 EIF4G3O43432 1585 aaKnown RBP23.44■■□□□ 1.34
ARPC1B-208ENST00000432343 TDRD9Q8NDG6 1382 aaKnown RBP23.38■■□□□ 1.33
ARPC1B-208ENST00000432343 AQRO60306 1485 aaKnown RBP eCLIP23.37■■□□□ 1.332e-6■■■■■ 27
ARPC1B-208ENST00000432343 ABCA10Q8WWZ4 1543 aa23.34■■□□□ 1.33
ARPC1B-208ENST00000432343 TRIM41Q8WV44 630 aa23.32■■□□□ 1.32
ARPC1B-208ENST00000432343 PBRM1Q86U86 1689 aa23.32■■□□□ 1.32
ARPC1B-208ENST00000432343 ABCA5Q8WWZ7 1642 aa23.3■■□□□ 1.32
ARPC1B-208ENST00000432343 GAPVD1Q14C86 1478 aa23.25■■□□□ 1.31
ARPC1B-208ENST00000432343 CHIC1Q5VXU3 224 aa23.2■■□□□ 1.3
ARPC1B-208ENST00000432343 GRIN2BQ13224 1484 aa23.19■■□□□ 1.3
ARPC1B-208ENST00000432343 DNAJC5Q9H3Z4 198 aa23.19■■□□□ 1.3
ARPC1B-208ENST00000432343 SNAPC4Q5SXM2 1469 aa23.18■■□□□ 1.3
ARPC1B-208ENST00000432343 CHD1O14646 1710 aa23.16■■□□□ 1.3
ARPC1B-208ENST00000432343 KIF27Q86VH2 1401 aa23.13■■□□□ 1.29
ARPC1B-208ENST00000432343 RUSC2Q8N2Y8 1516 aa23.1■■□□□ 1.29
ARPC1B-208ENST00000432343 FBLN2P98095 1184 aa23.1■■□□□ 1.29
ARPC1B-208ENST00000432343 MAGI1Q96QZ7 1491 aaPredicted RBP23.09■■□□□ 1.29
ARPC1B-208ENST00000432343 ERICH3Q5RHP9 1530 aa23.08■■□□□ 1.28
ARPC1B-208ENST00000432343 ADAMTS12P58397 1594 aa23.06■■□□□ 1.28
ARPC1B-208ENST00000432343 SYNJ2O15056 1496 aa23.01■■□□□ 1.27
ARPC1B-208ENST00000432343 CHMP7Q8WUX9 453 aaPredicted RBP23■■□□□ 1.27
ARPC1B-208ENST00000432343 CUL7Q14999 1698 aa22.99■■□□□ 1.27
ARPC1B-208ENST00000432343 IGF1RP08069 1367 aa22.97■■□□□ 1.27
ARPC1B-208ENST00000432343 FHAD1B1AJZ9 1412 aa22.97■■□□□ 1.27
ARPC1B-208ENST00000432343 FAM9AQ8IZU1 332 aaPredicted RBP22.95■■□□□ 1.26
ARPC1B-208ENST00000432343 OSCARQ8IYS5 282 aa22.93■■□□□ 1.26
ARPC1B-208ENST00000432343 GRIN2AQ12879 1464 aa22.92■■□□□ 1.26
ARPC1B-208ENST00000432343 CARMIL1Q5VZK9 1371 aa22.88■■□□□ 1.25
ARPC1B-208ENST00000432343 CEP170Q5SW79 1584 aa22.84■■□□□ 1.25
ARPC1B-208ENST00000432343 EEA1Q15075 1411 aa22.82■■□□□ 1.24
ARPC1B-208ENST00000432343 CSRNP3Q8WYN3 585 aa22.8■■□□□ 1.24
ARPC1B-208ENST00000432343 RAPGEF2Q9Y4G8 1499 aa22.79■■□□□ 1.24
ARPC1B-208ENST00000432343 CLASP1Q7Z460 1538 aa22.78■■□□□ 1.24
ARPC1B-208ENST00000432343 NUP160Q12769 1436 aa22.75■■□□□ 1.23
ARPC1B-208ENST00000432343 EHMT2Q96KQ7 1210 aa22.73■■□□□ 1.23
ARPC1B-208ENST00000432343 PRXQ9BXM0 1461 aa22.73■■□□□ 1.23
ARPC1B-208ENST00000432343 CTTNBP2Q8WZ74 1663 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms