RNA–Protein interactions for RNA: ENST00000445924.5

ARPC1B-210, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-210ENST00000445924 NISCHQ9Y2I1 1504 aa32.42■■■□□ 2.78
ARPC1B-210ENST00000445924 CCDC180Q9P1Z9 1646 aa28.58■■■□□ 2.17
ARPC1B-210ENST00000445924 ABCC9O60706 1549 aa27.22■■□□□ 1.95
ARPC1B-210ENST00000445924 ZCCHC6Q5VYS8 1495 aaKnown RBP27.15■■□□□ 1.94
ARPC1B-210ENST00000445924 DCAF8L2P0C7V8 631 aa26.89■■□□□ 1.9
ARPC1B-210ENST00000445924 DCAF1Q9Y4B6 1507 aa26.87■■□□□ 1.89
ARPC1B-210ENST00000445924 MYO15BQ96JP2 1530 aa26.72■■□□□ 1.87
ARPC1B-210ENST00000445924 NACADO15069 1562 aa26.68■■□□□ 1.86
ARPC1B-210ENST00000445924 RB1CC1Q8TDY2 1594 aa26.57■■□□□ 1.84
ARPC1B-210ENST00000445924 SCRIBQ14160 1630 aa26.12■■□□□ 1.77
ARPC1B-210ENST00000445924 SHROOM4Q9ULL8 1493 aa26.08■■□□□ 1.77
ARPC1B-210ENST00000445924 UNC13AQ9UPW8 1703 aa25.96■■□□□ 1.75
ARPC1B-210ENST00000445924 BICRAQ9NZM4 1560 aa25.62■■□□□ 1.69
ARPC1B-210ENST00000445924 PABPN1Q86U42 306 aaKnown RBP eCLIP25.54■■□□□ 1.68
ARPC1B-210ENST00000445924 BAZ1AQ9NRL2 1556 aaPredicted RBP25.14■■□□□ 1.61
ARPC1B-210ENST00000445924 CECR2Q9BXF3 1484 aa25.13■■□□□ 1.61
ARPC1B-210ENST00000445924 SMARCA4P51532 1647 aa25.04■■□□□ 1.6
ARPC1B-210ENST00000445924 MROH2BQ7Z745 1585 aa24.98■■□□□ 1.59
ARPC1B-210ENST00000445924 RSF1Q96T23 1441 aaPredicted RBP24.95■■□□□ 1.58
ARPC1B-210ENST00000445924 EIF4G1Q04637 1599 aaKnown RBP24.94■■□□□ 1.58
ARPC1B-210ENST00000445924 SUPT5HO00267 1087 aaKnown RBP24.94■■□□□ 1.58
ARPC1B-210ENST00000445924 WIZO95785 1651 aa24.8■■□□□ 1.56
ARPC1B-210ENST00000445924 SMARCA2P51531 1590 aa24.76■■□□□ 1.55
ARPC1B-210ENST00000445924 PEG3Q9GZU2 1588 aa24.75■■□□□ 1.55
ARPC1B-210ENST00000445924 ATAD2BQ9ULI0 1458 aa24.68■■□□□ 1.54
ARPC1B-210ENST00000445924 CC2D2AQ9P2K1 1620 aa24.68■■□□□ 1.54
ARPC1B-210ENST00000445924 TOP2AP11388 1531 aaKnown RBP24.58■■□□□ 1.53
ARPC1B-210ENST00000445924 BAZ1BQ9UIG0 1483 aaKnown RBP24.58■■□□□ 1.52
ARPC1B-210ENST00000445924 NCAPD3P42695 1498 aa24.55■■□□□ 1.52
ARPC1B-210ENST00000445924 HMGXB3Q12766 1538 aa24.54■■□□□ 1.52
ARPC1B-210ENST00000445924 CCDC88BA6NC98 1476 aa24.26■■□□□ 1.47
ARPC1B-210ENST00000445924 DNAJC5BQ9UF47 199 aa24.21■■□□□ 1.47
ARPC1B-210ENST00000445924 PRDM2Q13029 1718 aa23.9■■□□□ 1.42
ARPC1B-210ENST00000445924 CADPSQ9ULU8 1353 aa23.9■■□□□ 1.42
ARPC1B-210ENST00000445924 CFTRP13569 1480 aa23.89■■□□□ 1.42
ARPC1B-210ENST00000445924 LAMC3Q9Y6N6 1575 aa23.86■■□□□ 1.41
ARPC1B-210ENST00000445924 NESP48681 1621 aa23.73■■□□□ 1.39
ARPC1B-210ENST00000445924 PDS5BQ9NTI5 1447 aa23.68■■□□□ 1.38
ARPC1B-210ENST00000445924 FANCD2Q9BXW9 1451 aa23.64■■□□□ 1.38
ARPC1B-210ENST00000445924 CHIC1Q5VXU3 224 aa23.64■■□□□ 1.37
ARPC1B-210ENST00000445924 ABCC8Q09428 1581 aa23.61■■□□□ 1.37
ARPC1B-210ENST00000445924 CEP164Q9UPV0 1460 aa23.57■■□□□ 1.36
ARPC1B-210ENST00000445924 WRNQ14191 1432 aaPredicted RBP eCLIP23.56■■□□□ 1.36
ARPC1B-210ENST00000445924 KIF21AQ7Z4S6 1674 aa23.55■■□□□ 1.36
ARPC1B-210ENST00000445924 TRIM41Q8WV44 630 aa23.55■■□□□ 1.36
ARPC1B-210ENST00000445924 ERCC6Q03468 1493 aa23.48■■□□□ 1.35
ARPC1B-210ENST00000445924 BIVM-ERCC5R4GMW8 1640 aa23.44■■□□□ 1.34
ARPC1B-210ENST00000445924 TOP2BQ02880 1626 aa23.44■■□□□ 1.34
ARPC1B-210ENST00000445924 SYNJ1O43426 1573 aa23.44■■□□□ 1.34
ARPC1B-210ENST00000445924 DNMBPQ6XZF7 1577 aa23.4■■□□□ 1.34
ARPC1B-210ENST00000445924 CUX1P39880 1505 aa23.4■■□□□ 1.34
ARPC1B-210ENST00000445924 MRC2Q9UBG0 1479 aa23.36■■□□□ 1.33
ARPC1B-210ENST00000445924 TOPBP1Q92547 1522 aa23.33■■□□□ 1.33
ARPC1B-210ENST00000445924 URB2Q14146 1524 aaKnown RBP23.32■■□□□ 1.32
ARPC1B-210ENST00000445924 THOC2Q8NI27 1593 aaKnown RBP23.25■■□□□ 1.31
ARPC1B-210ENST00000445924 WDR62O43379 1518 aa23.24■■□□□ 1.31
ARPC1B-210ENST00000445924 FGD5Q6ZNL6 1462 aa23.24■■□□□ 1.31
ARPC1B-210ENST00000445924 POLA1P09884 1462 aaPredicted RBP23.17■■□□□ 1.3
ARPC1B-210ENST00000445924 SOGA1O94964 1423 aa23.12■■□□□ 1.29
ARPC1B-210ENST00000445924 EEA1Q15075 1411 aa23.1■■□□□ 1.29
ARPC1B-210ENST00000445924 RAD54L2Q9Y4B4 1467 aa23.05■■□□□ 1.28
ARPC1B-210ENST00000445924 ABCA10Q8WWZ4 1543 aa23.05■■□□□ 1.28
ARPC1B-210ENST00000445924 KIF27Q86VH2 1401 aa23.04■■□□□ 1.28
ARPC1B-210ENST00000445924 IFT140Q96RY7 1462 aa23.04■■□□□ 1.28
ARPC1B-210ENST00000445924 WDR97A6NE52 1622 aa23.03■■□□□ 1.28
ARPC1B-210ENST00000445924 FAM9AQ8IZU1 332 aaPredicted RBP23.02■■□□□ 1.28
ARPC1B-210ENST00000445924 CUX2O14529 1486 aa23.02■■□□□ 1.28
ARPC1B-210ENST00000445924 TARBP1Q13395 1621 aaKnown RBP23.01■■□□□ 1.27
ARPC1B-210ENST00000445924 RUSC2Q8N2Y8 1516 aa22.95■■□□□ 1.26
ARPC1B-210ENST00000445924 CSRNP3Q8WYN3 585 aa22.92■■□□□ 1.26
ARPC1B-210ENST00000445924 ABCA5Q8WWZ7 1642 aa22.9■■□□□ 1.26
ARPC1B-210ENST00000445924 GAPVD1Q14C86 1478 aa22.87■■□□□ 1.25
ARPC1B-210ENST00000445924 TDRD9Q8NDG6 1382 aaKnown RBP22.87■■□□□ 1.25
ARPC1B-210ENST00000445924 PBRM1Q86U86 1689 aa22.84■■□□□ 1.25
ARPC1B-210ENST00000445924 EIF4G3O43432 1585 aaKnown RBP22.81■■□□□ 1.24
ARPC1B-210ENST00000445924 ERICH3Q5RHP9 1530 aa22.81■■□□□ 1.24
ARPC1B-210ENST00000445924 ZNF608Q9ULD9 1512 aaPredicted RBP22.8■■□□□ 1.24
ARPC1B-210ENST00000445924 CUL7Q14999 1698 aa22.79■■□□□ 1.24
ARPC1B-210ENST00000445924 AQRO60306 1485 aaKnown RBP eCLIP22.79■■□□□ 1.242e-6■■■■■ 27
ARPC1B-210ENST00000445924 KIF21BO75037 1637 aa22.79■■□□□ 1.24
ARPC1B-210ENST00000445924 IGF1RP08069 1367 aa22.77■■□□□ 1.24
ARPC1B-210ENST00000445924 GRIN2BQ13224 1484 aa22.77■■□□□ 1.24
ARPC1B-210ENST00000445924 GOLGA3Q08378 1498 aa22.73■■□□□ 1.23
ARPC1B-210ENST00000445924 CARMIL1Q5VZK9 1371 aa22.71■■□□□ 1.23
ARPC1B-210ENST00000445924 PRXQ9BXM0 1461 aa22.71■■□□□ 1.23
ARPC1B-210ENST00000445924 RAPGEF2Q9Y4G8 1499 aa22.68■■□□□ 1.22
ARPC1B-210ENST00000445924 LOC105371045A0A1W2PR82 267 aa22.67■■□□□ 1.22
ARPC1B-210ENST00000445924 EHMT2Q96KQ7 1210 aa22.67■■□□□ 1.22
ARPC1B-210ENST00000445924 MAGI1Q96QZ7 1491 aaPredicted RBP22.65■■□□□ 1.22
ARPC1B-210ENST00000445924 ADAMTS12P58397 1594 aa22.64■■□□□ 1.22
ARPC1B-210ENST00000445924 FHAD1B1AJZ9 1412 aa22.64■■□□□ 1.21
ARPC1B-210ENST00000445924 SNAPC4Q5SXM2 1469 aa22.63■■□□□ 1.21
ARPC1B-210ENST00000445924 UBTFP17480 764 aaKnown RBP22.62■■□□□ 1.21
ARPC1B-210ENST00000445924 TNIKQ9UKE5 1360 aa22.54■■□□□ 1.2
ARPC1B-210ENST00000445924 SYNJ2O15056 1496 aa22.53■■□□□ 1.2
ARPC1B-210ENST00000445924 CHMP7Q8WUX9 453 aaPredicted RBP22.5■■□□□ 1.19
ARPC1B-210ENST00000445924 CTTNBP2Q8WZ74 1663 aa22.49■■□□□ 1.19
ARPC1B-210ENST00000445924 GRIN2AQ12879 1464 aa22.47■■□□□ 1.19
ARPC1B-210ENST00000445924 FBLN2P98095 1184 aa22.46■■□□□ 1.19
ARPC1B-210ENST00000445924 CHD1O14646 1710 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms