RNA–Protein interactions for RNA: ENST00000535993.1

CCND1-202, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-202ENST00000535993 NISCHQ9Y2I1 1504 aa30.27■■■□□ 2.44
CCND1-202ENST00000535993 CCDC180Q9P1Z9 1646 aa27.08■■□□□ 1.93
CCND1-202ENST00000535993 ABCC9O60706 1549 aa27.05■■□□□ 1.92
CCND1-202ENST00000535993 RB1CC1Q8TDY2 1594 aa25.78■■□□□ 1.72
CCND1-202ENST00000535993 NACADO15069 1562 aa25.65■■□□□ 1.7
CCND1-202ENST00000535993 DCAF8L2P0C7V8 631 aa25.6■■□□□ 1.69
CCND1-202ENST00000535993 MYO15BQ96JP2 1530 aa25.32■■□□□ 1.64
CCND1-202ENST00000535993 DNAJC5BQ9UF47 199 aa25.3■■□□□ 1.64
CCND1-202ENST00000535993 PABPN1Q86U42 306 aaKnown RBP eCLIP25.23■■□□□ 1.63
CCND1-202ENST00000535993 ZCCHC6Q5VYS8 1495 aaKnown RBP25.09■■□□□ 1.61
CCND1-202ENST00000535993 UNC13AQ9UPW8 1703 aa25.08■■□□□ 1.61
CCND1-202ENST00000535993 DCAF1Q9Y4B6 1507 aa25.02■■□□□ 1.6
CCND1-202ENST00000535993 BICRAQ9NZM4 1560 aa24.97■■□□□ 1.59
CCND1-202ENST00000535993 SHROOM4Q9ULL8 1493 aa24.74■■□□□ 1.55
CCND1-202ENST00000535993 SCRIBQ14160 1630 aa24.68■■□□□ 1.54
CCND1-202ENST00000535993 CC2D2AQ9P2K1 1620 aa24.41■■□□□ 1.5
CCND1-202ENST00000535993 EIF4G1Q04637 1599 aaKnown RBP24.39■■□□□ 1.5
CCND1-202ENST00000535993 CECR2Q9BXF3 1484 aa24.38■■□□□ 1.49
CCND1-202ENST00000535993 NCAPD3P42695 1498 aa23.68■■□□□ 1.38
CCND1-202ENST00000535993 ATAD2BQ9ULI0 1458 aa23.61■■□□□ 1.37
CCND1-202ENST00000535993 SMARCA4P51532 1647 aa23.56■■□□□ 1.36
CCND1-202ENST00000535993 SMARCA2P51531 1590 aa23.56■■□□□ 1.36
CCND1-202ENST00000535993 BAZ1AQ9NRL2 1556 aaPredicted RBP23.5■■□□□ 1.35
CCND1-202ENST00000535993 HMGXB3Q12766 1538 aa23.49■■□□□ 1.35
CCND1-202ENST00000535993 ERCC6Q03468 1493 aa23.39■■□□□ 1.34
CCND1-202ENST00000535993 BAZ1BQ9UIG0 1483 aaKnown RBP23.39■■□□□ 1.34
CCND1-202ENST00000535993 PEG3Q9GZU2 1588 aa23.35■■□□□ 1.33
CCND1-202ENST00000535993 CUX2O14529 1486 aa23.31■■□□□ 1.32
CCND1-202ENST00000535993 MROH2BQ7Z745 1585 aa23.3■■□□□ 1.32
CCND1-202ENST00000535993 DNAJC5Q9H3Z4 198 aa23.24■■□□□ 1.31
CCND1-202ENST00000535993 NESP48681 1621 aa23.23■■□□□ 1.31
CCND1-202ENST00000535993 LAMC3Q9Y6N6 1575 aa23.1■■□□□ 1.29
CCND1-202ENST00000535993 PDS5BQ9NTI5 1447 aa23.04■■□□□ 1.28
CCND1-202ENST00000535993 WIZO95785 1651 aa22.99■■□□□ 1.27
CCND1-202ENST00000535993 CADPSQ9ULU8 1353 aa22.99■■□□□ 1.27
CCND1-202ENST00000535993 THOC2Q8NI27 1593 aaKnown RBP22.96■■□□□ 1.27
CCND1-202ENST00000535993 KIF21AQ7Z4S6 1674 aa22.89■■□□□ 1.25
CCND1-202ENST00000535993 RSF1Q96T23 1441 aaPredicted RBP22.89■■□□□ 1.25
CCND1-202ENST00000535993 MRC2Q9UBG0 1479 aa22.79■■□□□ 1.24
CCND1-202ENST00000535993 TOP2AP11388 1531 aaKnown RBP22.76■■□□□ 1.23
CCND1-202ENST00000535993 CFTRP13569 1480 aa22.72■■□□□ 1.23
CCND1-202ENST00000535993 CEP164Q9UPV0 1460 aa22.72■■□□□ 1.23
CCND1-202ENST00000535993 WDR62O43379 1518 aa22.71■■□□□ 1.23
CCND1-202ENST00000535993 FANCD2Q9BXW9 1451 aa22.7■■□□□ 1.22
CCND1-202ENST00000535993 CCDC88BA6NC98 1476 aa22.51■■□□□ 1.19
CCND1-202ENST00000535993 URB2Q14146 1524 aaKnown RBP22.47■■□□□ 1.19
CCND1-202ENST00000535993 PRDM2Q13029 1718 aa22.39■■□□□ 1.17
CCND1-202ENST00000535993 OSCARQ8IYS5 282 aa22.32■■□□□ 1.16
CCND1-202ENST00000535993 IFT140Q96RY7 1462 aa22.28■■□□□ 1.16
CCND1-202ENST00000535993 ABCC8Q09428 1581 aa22.27■■□□□ 1.16
CCND1-202ENST00000535993 TOPBP1Q92547 1522 aa22.26■■□□□ 1.15
CCND1-202ENST00000535993 TRIM41Q8WV44 630 aa22.25■■□□□ 1.15
CCND1-202ENST00000535993 ZNF608Q9ULD9 1512 aaPredicted RBP22.19■■□□□ 1.14
CCND1-202ENST00000535993 DNMBPQ6XZF7 1577 aa22.18■■□□□ 1.14
CCND1-202ENST00000535993 EIF4G3O43432 1585 aaKnown RBP22.04■■□□□ 1.12
CCND1-202ENST00000535993 POLA1P09884 1462 aaPredicted RBP22.04■■□□□ 1.12
CCND1-202ENST00000535993 AQRO60306 1485 aaKnown RBP eCLIP22.03■■□□□ 1.129e-11■■■■□ 20.6
CCND1-202ENST00000535993 TARBP1Q13395 1621 aaKnown RBP22.02■■□□□ 1.11
CCND1-202ENST00000535993 SOGA1O94964 1423 aa21.98■■□□□ 1.11
CCND1-202ENST00000535993 SUPT5HO00267 1087 aaKnown RBP21.97■■□□□ 1.11
CCND1-202ENST00000535993 RAD54L2Q9Y4B4 1467 aa21.96■■□□□ 1.11
CCND1-202ENST00000535993 TDRD9Q8NDG6 1382 aaKnown RBP21.92■■□□□ 1.1
CCND1-202ENST00000535993 FBLN2P98095 1184 aa21.92■■□□□ 1.1
CCND1-202ENST00000535993 FGD5Q6ZNL6 1462 aa21.91■■□□□ 1.1
CCND1-202ENST00000535993 RIMBP3CA6NJZ7 1639 aa21.9■■□□□ 1.1
CCND1-202ENST00000535993 RIMBP3BA6NNM3 1639 aa21.9■■□□□ 1.1
CCND1-202ENST00000535993 RIMBP3Q9UFD9 1639 aa21.9■■□□□ 1.1
CCND1-202ENST00000535993 CUX1P39880 1505 aa21.89■■□□□ 1.09
CCND1-202ENST00000535993 ARHGEF11O15085 1522 aa21.87■■□□□ 1.09
CCND1-202ENST00000535993 WDR97A6NE52 1622 aa21.85■■□□□ 1.09
CCND1-202ENST00000535993 CHD1O14646 1710 aa21.83■■□□□ 1.09
CCND1-202ENST00000535993 SNAPC4Q5SXM2 1469 aa21.79■■□□□ 1.08
CCND1-202ENST00000535993 CHMP7Q8WUX9 453 aaPredicted RBP21.79■■□□□ 1.08
CCND1-202ENST00000535993 GRIN2BQ13224 1484 aa21.77■■□□□ 1.08
CCND1-202ENST00000535993 CYB5RLQ6IPT4 315 aa21.77■■□□□ 1.08
CCND1-202ENST00000535993 MAGI1Q96QZ7 1491 aaPredicted RBP21.76■■□□□ 1.07
CCND1-202ENST00000535993 GAPVD1Q14C86 1478 aa21.71■■□□□ 1.07
CCND1-202ENST00000535993 SYNJ2O15056 1496 aa21.69■■□□□ 1.06
CCND1-202ENST00000535993 ABCA10Q8WWZ4 1543 aa21.69■■□□□ 1.06
CCND1-202ENST00000535993 SYNJ1O43426 1573 aa21.66■■□□□ 1.06
CCND1-202ENST00000535993 ARAP1Q96P48 1450 aa21.65■■□□□ 1.06
CCND1-202ENST00000535993 WRNQ14191 1432 aaPredicted RBP eCLIP21.65■■□□□ 1.06
CCND1-202ENST00000535993 CLASP1Q7Z460 1538 aa21.63■■□□□ 1.05
CCND1-202ENST00000535993 PBRM1Q86U86 1689 aa21.6■■□□□ 1.05
CCND1-202ENST00000535993 ABCA5Q8WWZ7 1642 aa21.59■■□□□ 1.05
CCND1-202ENST00000535993 TOP2BQ02880 1626 aa21.56■■□□□ 1.04
CCND1-202ENST00000535993 BIVM-ERCC5R4GMW8 1640 aa21.53■■□□□ 1.04
CCND1-202ENST00000535993 TRHP20396 242 aaPredicted RBP21.52■■□□□ 1.04
CCND1-202ENST00000535993 GRIN2AQ12879 1464 aa21.47■■□□□ 1.03
CCND1-202ENST00000535993 FHAD1B1AJZ9 1412 aa21.45■■□□□ 1.02
CCND1-202ENST00000535993 ADAMTS12P58397 1594 aa21.44■■□□□ 1.02
CCND1-202ENST00000535993 ERICH3Q5RHP9 1530 aa21.41■■□□□ 1.02
CCND1-202ENST00000535993 NUP160Q12769 1436 aa21.4■■□□□ 1.02
CCND1-202ENST00000535993 CEP170Q5SW79 1584 aa21.35■■□□□ 1.01
CCND1-202ENST00000535993 ERCC6L2Q5T890 1561 aa21.27■■□□□ 1
CCND1-202ENST00000535993 SHROOM2Q13796 1616 aa21.25■□□□□ 0.99
CCND1-202ENST00000535993 JPH4Q96JJ6 628 aa21.24■□□□□ 0.99
CCND1-202ENST00000535993 KIF27Q86VH2 1401 aa21.21■□□□□ 0.99
CCND1-202ENST00000535993 PRG4Q92954 1404 aaPredicted RBP21.21■□□□□ 0.99
CCND1-202ENST00000535993 IGF1RP08069 1367 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms