Protein–RNA interactions for Protein: P00846

MT-ATP6, ATP synthase subunit a, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ATP6P00846 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ATP6P00846 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ATP6P00846 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ATP6P00846 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
MT-ATP6P00846 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ATP6P00846 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ATP6P00846 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.97□□□□□ -0.17
MT-ATP6P00846 AC055876.3-201ENST00000431496 288 ntBASIC13.97□□□□□ -0.17
MT-ATP6P00846 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.97□□□□□ -0.17
MT-ATP6P00846 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.97□□□□□ -0.17
MT-ATP6P00846 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.97□□□□□ -0.17
MT-ATP6P00846 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.97□□□□□ -0.17
MT-ATP6P00846 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.97□□□□□ -0.17
MT-ATP6P00846 DUX4L27-201ENST00000554796 1261 ntBASIC13.97□□□□□ -0.17
MT-ATP6P00846 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ATP6P00846 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.97□□□□□ -0.17
MT-ATP6P00846 AC138649.4-201ENST00000612222 287 ntBASIC13.97□□□□□ -0.17
MT-ATP6P00846 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.97□□□□□ -0.17
MT-ATP6P00846 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
MT-ATP6P00846 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.97□□□□□ -0.17
MT-ATP6P00846 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ATP6P00846 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.97□□□□□ -0.17
MT-ATP6P00846 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ATP6P00846 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ATP6P00846 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ATP6P00846 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ATP6P00846 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ATP6P00846 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.97□□□□□ -0.17
MT-ATP6P00846 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ATP6P00846 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ATP6P00846 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ATP6P00846 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ATP6P00846 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ATP6P00846 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
MT-ATP6P00846 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ATP6P00846 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
MT-ATP6P00846 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ATP6P00846 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ATP6P00846 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ATP6P00846 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ATP6P00846 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ATP6P00846 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ATP6P00846 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ATP6P00846 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ATP6P00846 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ATP6P00846 LINC01101-201ENST00000622953 1884 ntBASIC13.96□□□□□ -0.17
MT-ATP6P00846 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ATP6P00846 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ATP6P00846 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ATP6P00846 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ATP6P00846 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 AC104457.1-201ENST00000401024 814 ntBASIC13.96□□□□□ -0.17
MT-ATP6P00846 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 AL390754.1-201ENST00000619088 582 ntBASIC13.96□□□□□ -0.17
MT-ATP6P00846 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ATP6P00846 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ATP6P00846 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ATP6P00846 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.96□□□□□ -0.17
MT-ATP6P00846 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ATP6P00846 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.96□□□□□ -0.18
MT-ATP6P00846 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.96□□□□□ -0.18
MT-ATP6P00846 MST1L-201ENST00000442552 2185 ntBASIC13.96□□□□□ -0.18
MT-ATP6P00846 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
MT-ATP6P00846 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
MT-ATP6P00846 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
MT-ATP6P00846 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.96□□□□□ -0.18
MT-ATP6P00846 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
MT-ATP6P00846 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
MT-ATP6P00846 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
MT-ATP6P00846 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
MT-ATP6P00846 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
MT-ATP6P00846 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms