Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HIST1H2AAQ96QV6 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
HIST1H2AAQ96QV6 DUX4L18-201ENST00000553347 1267 ntBASIC20■□□□□ 0.79
HIST1H2AAQ96QV6 BHLHE23-202ENST00000612929 1109 ntBASIC20■□□□□ 0.79
HIST1H2AAQ96QV6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HIST1H2AAQ96QV6 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20■□□□□ 0.79
HIST1H2AAQ96QV6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20■□□□□ 0.79
HIST1H2AAQ96QV6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HIST1H2AAQ96QV6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HIST1H2AAQ96QV6 AC141586.4-201ENST00000624558 1573 ntBASIC19.99■□□□□ 0.79
HIST1H2AAQ96QV6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HIST1H2AAQ96QV6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
HIST1H2AAQ96QV6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HIST1H2AAQ96QV6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HIST1H2AAQ96QV6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HIST1H2AAQ96QV6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HIST1H2AAQ96QV6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
HIST1H2AAQ96QV6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.98■□□□□ 0.79
HIST1H2AAQ96QV6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
HIST1H2AAQ96QV6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HIST1H2AAQ96QV6 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.98■□□□□ 0.79
HIST1H2AAQ96QV6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.98■□□□□ 0.79
HIST1H2AAQ96QV6 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HIST1H2AAQ96QV6 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HIST1H2AAQ96QV6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HIST1H2AAQ96QV6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
HIST1H2AAQ96QV6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.98■□□□□ 0.79
HIST1H2AAQ96QV6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
HIST1H2AAQ96QV6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HIST1H2AAQ96QV6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
HIST1H2AAQ96QV6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HIST1H2AAQ96QV6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HIST1H2AAQ96QV6 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HIST1H2AAQ96QV6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HIST1H2AAQ96QV6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HIST1H2AAQ96QV6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.97■□□□□ 0.79
HIST1H2AAQ96QV6 LONRF2P2-201ENST00000439212 571 ntBASIC19.97■□□□□ 0.79
HIST1H2AAQ96QV6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.97■□□□□ 0.79
HIST1H2AAQ96QV6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.97■□□□□ 0.79
HIST1H2AAQ96QV6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
HIST1H2AAQ96QV6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
HIST1H2AAQ96QV6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.97■□□□□ 0.79
HIST1H2AAQ96QV6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HIST1H2AAQ96QV6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HIST1H2AAQ96QV6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HIST1H2AAQ96QV6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
HIST1H2AAQ96QV6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HIST1H2AAQ96QV6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
HIST1H2AAQ96QV6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HIST1H2AAQ96QV6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.96■□□□□ 0.79
HIST1H2AAQ96QV6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.96■□□□□ 0.79
HIST1H2AAQ96QV6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
HIST1H2AAQ96QV6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
HIST1H2AAQ96QV6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HIST1H2AAQ96QV6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HIST1H2AAQ96QV6 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HIST1H2AAQ96QV6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HIST1H2AAQ96QV6 LINC00543-201ENST00000567234 1845 ntBASIC19.95■□□□□ 0.78
HIST1H2AAQ96QV6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.95■□□□□ 0.78
HIST1H2AAQ96QV6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HIST1H2AAQ96QV6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
HIST1H2AAQ96QV6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
HIST1H2AAQ96QV6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.95■□□□□ 0.78
HIST1H2AAQ96QV6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HIST1H2AAQ96QV6 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HIST1H2AAQ96QV6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.95■□□□□ 0.78
HIST1H2AAQ96QV6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIST1H2AAQ96QV6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.94■□□□□ 0.78
HIST1H2AAQ96QV6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.94■□□□□ 0.78
HIST1H2AAQ96QV6 AC090877.2-201ENST00000558441 1738 ntBASIC19.94■□□□□ 0.78
HIST1H2AAQ96QV6 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.94■□□□□ 0.78
HIST1H2AAQ96QV6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HIST1H2AAQ96QV6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.94■□□□□ 0.78
HIST1H2AAQ96QV6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIST1H2AAQ96QV6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIST1H2AAQ96QV6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIST1H2AAQ96QV6 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIST1H2AAQ96QV6 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIST1H2AAQ96QV6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
HIST1H2AAQ96QV6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HIST1H2AAQ96QV6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.92■□□□□ 0.78
HIST1H2AAQ96QV6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.92■□□□□ 0.78
HIST1H2AAQ96QV6 ATP5G2P3-201ENST00000429083 425 ntBASIC19.92■□□□□ 0.78
HIST1H2AAQ96QV6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HIST1H2AAQ96QV6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIST1H2AAQ96QV6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HIST1H2AAQ96QV6 AC074183.2-201ENST00000623112 922 ntBASIC19.92■□□□□ 0.78
HIST1H2AAQ96QV6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HIST1H2AAQ96QV6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIST1H2AAQ96QV6 HLA-L-211ENST00000482052 1765 ntBASIC19.92■□□□□ 0.78
HIST1H2AAQ96QV6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIST1H2AAQ96QV6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HIST1H2AAQ96QV6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIST1H2AAQ96QV6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.92■□□□□ 0.78
HIST1H2AAQ96QV6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIST1H2AAQ96QV6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HIST1H2AAQ96QV6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIST1H2AAQ96QV6 AC004987.1-201ENST00000428627 508 ntBASIC19.91■□□□□ 0.78
HIST1H2AAQ96QV6 AC022616.5-201ENST00000518796 181 ntBASIC19.91■□□□□ 0.78
HIST1H2AAQ96QV6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms