Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.66■■□□□ 1.06
MS4A4EQ96PG1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.66■■□□□ 1.06
MS4A4EQ96PG1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.66■■□□□ 1.06
MS4A4EQ96PG1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MS4A4EQ96PG1 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MS4A4EQ96PG1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MS4A4EQ96PG1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.65■■□□□ 1.06
MS4A4EQ96PG1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MS4A4EQ96PG1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
MS4A4EQ96PG1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MS4A4EQ96PG1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MS4A4EQ96PG1 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MS4A4EQ96PG1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MS4A4EQ96PG1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
MS4A4EQ96PG1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
MS4A4EQ96PG1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MS4A4EQ96PG1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MS4A4EQ96PG1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
MS4A4EQ96PG1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.64■■□□□ 1.05
MS4A4EQ96PG1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.64■■□□□ 1.05
MS4A4EQ96PG1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.64■■□□□ 1.05
MS4A4EQ96PG1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
MS4A4EQ96PG1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
MS4A4EQ96PG1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
MS4A4EQ96PG1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
MS4A4EQ96PG1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.63■■□□□ 1.05
MS4A4EQ96PG1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.63■■□□□ 1.05
MS4A4EQ96PG1 AL033527.3-201ENST00000566366 1196 ntBASIC21.63■■□□□ 1.05
MS4A4EQ96PG1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.63■■□□□ 1.05
MS4A4EQ96PG1 AC010980.1-201ENST00000587192 1142 ntBASIC21.63■■□□□ 1.05
MS4A4EQ96PG1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MS4A4EQ96PG1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MS4A4EQ96PG1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MS4A4EQ96PG1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MS4A4EQ96PG1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MS4A4EQ96PG1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.62■■□□□ 1.05
MS4A4EQ96PG1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MS4A4EQ96PG1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MS4A4EQ96PG1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MS4A4EQ96PG1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.62■■□□□ 1.05
MS4A4EQ96PG1 PVT1_1.1-201ENST00000615125 194 ntBASIC21.62■■□□□ 1.05
MS4A4EQ96PG1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MS4A4EQ96PG1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.62■■□□□ 1.05
MS4A4EQ96PG1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.62■■□□□ 1.05
MS4A4EQ96PG1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
MS4A4EQ96PG1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.61■■□□□ 1.05
MS4A4EQ96PG1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MS4A4EQ96PG1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.61■■□□□ 1.05
MS4A4EQ96PG1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
MS4A4EQ96PG1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.61■■□□□ 1.05
MS4A4EQ96PG1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
MS4A4EQ96PG1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
MS4A4EQ96PG1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
MS4A4EQ96PG1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MS4A4EQ96PG1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
MS4A4EQ96PG1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.6■■□□□ 1.05
MS4A4EQ96PG1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
MS4A4EQ96PG1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MS4A4EQ96PG1 AC004812.2-201ENST00000611079 2094 ntBASIC21.6■■□□□ 1.05
MS4A4EQ96PG1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MS4A4EQ96PG1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
MS4A4EQ96PG1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MS4A4EQ96PG1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.59■■□□□ 1.05
MS4A4EQ96PG1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
MS4A4EQ96PG1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.59■■□□□ 1.05
MS4A4EQ96PG1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
MS4A4EQ96PG1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.59■■□□□ 1.05
MS4A4EQ96PG1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.59■■□□□ 1.05
MS4A4EQ96PG1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.59■■□□□ 1.05
MS4A4EQ96PG1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.59■■□□□ 1.05
MS4A4EQ96PG1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.59■■□□□ 1.05
MS4A4EQ96PG1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
MS4A4EQ96PG1 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.59■■□□□ 1.05
MS4A4EQ96PG1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.59■■□□□ 1.05
MS4A4EQ96PG1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MS4A4EQ96PG1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
MS4A4EQ96PG1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
MS4A4EQ96PG1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
MS4A4EQ96PG1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.58■■□□□ 1.04
MS4A4EQ96PG1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MS4A4EQ96PG1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MS4A4EQ96PG1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MS4A4EQ96PG1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
MS4A4EQ96PG1 AC120024.1-201ENST00000562672 995 ntBASIC21.57■■□□□ 1.04
MS4A4EQ96PG1 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MS4A4EQ96PG1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.57■■□□□ 1.04
MS4A4EQ96PG1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MS4A4EQ96PG1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MS4A4EQ96PG1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
MS4A4EQ96PG1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MS4A4EQ96PG1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MS4A4EQ96PG1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MS4A4EQ96PG1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MS4A4EQ96PG1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
MS4A4EQ96PG1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MS4A4EQ96PG1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MS4A4EQ96PG1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
MS4A4EQ96PG1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.56■■□□□ 1.04
MS4A4EQ96PG1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.56■■□□□ 1.04
MS4A4EQ96PG1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms