Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.33■■□□□ 1.16
SLC46A1Q96NT5 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SLC46A1Q96NT5 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SLC46A1Q96NT5 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
SLC46A1Q96NT5 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.32■■□□□ 1.16
SLC46A1Q96NT5 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.32■■□□□ 1.16
SLC46A1Q96NT5 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SLC46A1Q96NT5 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
SLC46A1Q96NT5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.32■■□□□ 1.16
SLC46A1Q96NT5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.32■■□□□ 1.16
SLC46A1Q96NT5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.32■■□□□ 1.16
SLC46A1Q96NT5 AC092666.2-201ENST00000613287 246 ntBASIC22.32■■□□□ 1.16
SLC46A1Q96NT5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.32■■□□□ 1.16
SLC46A1Q96NT5 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.32■■□□□ 1.16
SLC46A1Q96NT5 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SLC46A1Q96NT5 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
SLC46A1Q96NT5 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SLC46A1Q96NT5 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLC46A1Q96NT5 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLC46A1Q96NT5 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLC46A1Q96NT5 UNC93B3-201ENST00000308076 687 ntBASIC22.31■■□□□ 1.16
SLC46A1Q96NT5 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SLC46A1Q96NT5 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SLC46A1Q96NT5 FOXO3B-201ENST00000395675 1928 ntBASIC22.31■■□□□ 1.16
SLC46A1Q96NT5 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SLC46A1Q96NT5 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLC46A1Q96NT5 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SLC46A1Q96NT5 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.3■■□□□ 1.16
SLC46A1Q96NT5 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
SLC46A1Q96NT5 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.3■■□□□ 1.16
SLC46A1Q96NT5 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.3■■□□□ 1.16
SLC46A1Q96NT5 SNX5-217ENST00000606557 1087 ntBASIC22.3■■□□□ 1.16
SLC46A1Q96NT5 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLC46A1Q96NT5 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLC46A1Q96NT5 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLC46A1Q96NT5 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLC46A1Q96NT5 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLC46A1Q96NT5 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLC46A1Q96NT5 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SLC46A1Q96NT5 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLC46A1Q96NT5 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SLC46A1Q96NT5 SUDS3P1-201ENST00000505831 966 ntBASIC22.29■■□□□ 1.16
SLC46A1Q96NT5 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.29■■□□□ 1.16
SLC46A1Q96NT5 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLC46A1Q96NT5 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SLC46A1Q96NT5 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.29■■□□□ 1.16
SLC46A1Q96NT5 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
SLC46A1Q96NT5 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC46A1Q96NT5 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC46A1Q96NT5 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
SLC46A1Q96NT5 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.28■■□□□ 1.16
SLC46A1Q96NT5 AL031432.3-201ENST00000607698 485 ntBASIC22.28■■□□□ 1.16
SLC46A1Q96NT5 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC46A1Q96NT5 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
SLC46A1Q96NT5 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.28■■□□□ 1.16
SLC46A1Q96NT5 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
SLC46A1Q96NT5 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
SLC46A1Q96NT5 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
SLC46A1Q96NT5 AC026271.2-201ENST00000428091 497 ntBASIC22.27■■□□□ 1.16
SLC46A1Q96NT5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.27■■□□□ 1.16
SLC46A1Q96NT5 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SLC46A1Q96NT5 AL136162.1-201ENST00000607711 1078 ntBASIC22.27■■□□□ 1.16
SLC46A1Q96NT5 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SLC46A1Q96NT5 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SLC46A1Q96NT5 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SLC46A1Q96NT5 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SLC46A1Q96NT5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SLC46A1Q96NT5 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
SLC46A1Q96NT5 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.26■■□□□ 1.15
SLC46A1Q96NT5 AC096887.2-201ENST00000623443 1957 ntBASIC22.26■■□□□ 1.15
SLC46A1Q96NT5 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SLC46A1Q96NT5 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.26■■□□□ 1.15
SLC46A1Q96NT5 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SLC46A1Q96NT5 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
SLC46A1Q96NT5 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC46A1Q96NT5 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC46A1Q96NT5 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SLC46A1Q96NT5 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.25■■□□□ 1.15
SLC46A1Q96NT5 AC135279.3-201ENST00000610945 1311 ntBASIC22.25■■□□□ 1.15
SLC46A1Q96NT5 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC46A1Q96NT5 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SLC46A1Q96NT5 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SLC46A1Q96NT5 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SLC46A1Q96NT5 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SLC46A1Q96NT5 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.24■■□□□ 1.15
SLC46A1Q96NT5 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.24■■□□□ 1.15
SLC46A1Q96NT5 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
SLC46A1Q96NT5 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SLC46A1Q96NT5 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SLC46A1Q96NT5 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SLC46A1Q96NT5 EDA-201ENST00000338901 1233 ntBASIC22.23■■□□□ 1.15
SLC46A1Q96NT5 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.23■■□□□ 1.15
SLC46A1Q96NT5 AC090877.2-201ENST00000558441 1738 ntBASIC22.23■■□□□ 1.15
SLC46A1Q96NT5 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
SLC46A1Q96NT5 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLC46A1Q96NT5 SRD5A1P1-201ENST00000442297 786 ntBASIC22.22■■□□□ 1.15
SLC46A1Q96NT5 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.22■■□□□ 1.15
SLC46A1Q96NT5 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.22■■□□□ 1.15
SLC46A1Q96NT5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.22■■□□□ 1.15
SLC46A1Q96NT5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms