Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV5A0A0B4J249 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRAV5A0A0B4J249 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV5A0A0B4J249 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAV5A0A0B4J249 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.99■□□□□ 0.47
TRAV5A0A0B4J249 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV5A0A0B4J249 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRAV5A0A0B4J249 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRAV5A0A0B4J249 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV5A0A0B4J249 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV5A0A0B4J249 AC079834.2-201ENST00000609776 1949 ntBASIC17.99■□□□□ 0.47
TRAV5A0A0B4J249 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.99■□□□□ 0.47
TRAV5A0A0B4J249 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV5A0A0B4J249 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV5A0A0B4J249 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TRAV5A0A0B4J249 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV5A0A0B4J249 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV5A0A0B4J249 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV5A0A0B4J249 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAV5A0A0B4J249 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.98■□□□□ 0.47
TRAV5A0A0B4J249 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV5A0A0B4J249 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV5A0A0B4J249 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.98■□□□□ 0.47
TRAV5A0A0B4J249 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.97■□□□□ 0.47
TRAV5A0A0B4J249 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV5A0A0B4J249 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAV5A0A0B4J249 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TRAV5A0A0B4J249 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV5A0A0B4J249 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV5A0A0B4J249 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TRAV5A0A0B4J249 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV5A0A0B4J249 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV5A0A0B4J249 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TRAV5A0A0B4J249 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV5A0A0B4J249 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV5A0A0B4J249 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV5A0A0B4J249 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TRAV5A0A0B4J249 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV5A0A0B4J249 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV5A0A0B4J249 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV5A0A0B4J249 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TRAV5A0A0B4J249 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV5A0A0B4J249 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV5A0A0B4J249 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV5A0A0B4J249 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV5A0A0B4J249 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV5A0A0B4J249 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TRAV5A0A0B4J249 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV5A0A0B4J249 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV5A0A0B4J249 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.95■□□□□ 0.46
TRAV5A0A0B4J249 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TRAV5A0A0B4J249 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TRAV5A0A0B4J249 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.95■□□□□ 0.46
TRAV5A0A0B4J249 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.95■□□□□ 0.46
TRAV5A0A0B4J249 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
TRAV5A0A0B4J249 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV5A0A0B4J249 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV5A0A0B4J249 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAV5A0A0B4J249 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV5A0A0B4J249 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV5A0A0B4J249 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TRAV5A0A0B4J249 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV5A0A0B4J249 RP9P-202ENST00000450133 1212 ntBASIC17.94■□□□□ 0.46
TRAV5A0A0B4J249 AC092296.2-201ENST00000589470 999 ntBASIC17.94■□□□□ 0.46
TRAV5A0A0B4J249 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAV5A0A0B4J249 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV5A0A0B4J249 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAV5A0A0B4J249 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV5A0A0B4J249 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV5A0A0B4J249 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV5A0A0B4J249 FOXO3B-201ENST00000395675 1928 ntBASIC17.94■□□□□ 0.46
TRAV5A0A0B4J249 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TRAV5A0A0B4J249 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV5A0A0B4J249 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV5A0A0B4J249 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV5A0A0B4J249 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV5A0A0B4J249 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV5A0A0B4J249 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV5A0A0B4J249 AC093536.1-201ENST00000569153 554 ntBASIC17.93■□□□□ 0.46
TRAV5A0A0B4J249 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV5A0A0B4J249 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV5A0A0B4J249 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV5A0A0B4J249 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV5A0A0B4J249 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV5A0A0B4J249 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAV5A0A0B4J249 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV5A0A0B4J249 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV5A0A0B4J249 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV5A0A0B4J249 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV5A0A0B4J249 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV5A0A0B4J249 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV5A0A0B4J249 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV5A0A0B4J249 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV5A0A0B4J249 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV5A0A0B4J249 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV5A0A0B4J249 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TRAV5A0A0B4J249 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV5A0A0B4J249 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAV5A0A0B4J249 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TRAV5A0A0B4J249 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms