Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-2A0A0B4J237 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV8-2A0A0B4J237 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-2A0A0B4J237 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-2A0A0B4J237 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-2A0A0B4J237 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.57■□□□□ 0.4
TRAV8-2A0A0B4J237 AC018755.3-202ENST00000596210 929 ntBASIC17.57■□□□□ 0.4
TRAV8-2A0A0B4J237 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRAV8-2A0A0B4J237 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-2A0A0B4J237 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-2A0A0B4J237 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-2A0A0B4J237 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-2A0A0B4J237 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-2A0A0B4J237 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-2A0A0B4J237 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-2A0A0B4J237 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-2A0A0B4J237 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAV8-2A0A0B4J237 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-2A0A0B4J237 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-2A0A0B4J237 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-2A0A0B4J237 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAV8-2A0A0B4J237 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-2A0A0B4J237 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-2A0A0B4J237 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV8-2A0A0B4J237 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV8-2A0A0B4J237 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV8-2A0A0B4J237 RARRES2P2-201ENST00000394842 485 ntBASIC17.55■□□□□ 0.4
TRAV8-2A0A0B4J237 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV8-2A0A0B4J237 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAV8-2A0A0B4J237 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAV8-2A0A0B4J237 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV8-2A0A0B4J237 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
TRAV8-2A0A0B4J237 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TRAV8-2A0A0B4J237 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV8-2A0A0B4J237 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-2A0A0B4J237 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-2A0A0B4J237 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
TRAV8-2A0A0B4J237 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-2A0A0B4J237 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV8-2A0A0B4J237 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-2A0A0B4J237 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-2A0A0B4J237 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV8-2A0A0B4J237 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-2A0A0B4J237 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TRAV8-2A0A0B4J237 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
TRAV8-2A0A0B4J237 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAV8-2A0A0B4J237 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-2A0A0B4J237 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAV8-2A0A0B4J237 ABCB10P4-201ENST00000566803 2184 ntBASIC17.54■□□□□ 0.4
TRAV8-2A0A0B4J237 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAV8-2A0A0B4J237 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRAV8-2A0A0B4J237 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-2A0A0B4J237 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-2A0A0B4J237 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-2A0A0B4J237 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
TRAV8-2A0A0B4J237 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TRAV8-2A0A0B4J237 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV8-2A0A0B4J237 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAV8-2A0A0B4J237 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV8-2A0A0B4J237 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV8-2A0A0B4J237 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV8-2A0A0B4J237 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TRAV8-2A0A0B4J237 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV8-2A0A0B4J237 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV8-2A0A0B4J237 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC17.53■□□□□ 0.4
TRAV8-2A0A0B4J237 DUX4L9-201ENST00000449051 1259 ntBASIC17.53■□□□□ 0.4
TRAV8-2A0A0B4J237 AC087393.1-201ENST00000582896 145 ntBASIC17.53■□□□□ 0.4
TRAV8-2A0A0B4J237 HSD17B1P1-201ENST00000590052 955 ntBASIC17.53■□□□□ 0.4
TRAV8-2A0A0B4J237 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
TRAV8-2A0A0B4J237 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV8-2A0A0B4J237 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV8-2A0A0B4J237 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV8-2A0A0B4J237 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV8-2A0A0B4J237 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.52■□□□□ 0.4
TRAV8-2A0A0B4J237 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV8-2A0A0B4J237 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV8-2A0A0B4J237 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV8-2A0A0B4J237 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV8-2A0A0B4J237 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV8-2A0A0B4J237 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV8-2A0A0B4J237 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAV8-2A0A0B4J237 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV8-2A0A0B4J237 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.51■□□□□ 0.39
TRAV8-2A0A0B4J237 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.51■□□□□ 0.39
TRAV8-2A0A0B4J237 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV8-2A0A0B4J237 MIR6765-201ENST00000614092 87 ntBASIC17.51■□□□□ 0.39
TRAV8-2A0A0B4J237 U85056.1-201ENST00000616429 682 ntBASIC17.51■□□□□ 0.39
TRAV8-2A0A0B4J237 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TRAV8-2A0A0B4J237 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV8-2A0A0B4J237 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV8-2A0A0B4J237 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRAV8-2A0A0B4J237 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRAV8-2A0A0B4J237 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAV8-2A0A0B4J237 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TRAV8-2A0A0B4J237 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.5■□□□□ 0.39
TRAV8-2A0A0B4J237 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAV8-2A0A0B4J237 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV8-2A0A0B4J237 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV8-2A0A0B4J237 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
TRAV8-2A0A0B4J237 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms