Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
TRBV6-8A0A0A6YYG3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-8A0A0A6YYG3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-8A0A0A6YYG3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-8A0A0A6YYG3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRBV6-8A0A0A6YYG3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-8A0A0A6YYG3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-8A0A0A6YYG3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-8A0A0A6YYG3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRBV6-8A0A0A6YYG3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRBV6-8A0A0A6YYG3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC16.11■□□□□ 0.17
TRBV6-8A0A0A6YYG3 U85056.1-201ENST00000616429 682 ntBASIC16.11■□□□□ 0.17
TRBV6-8A0A0A6YYG3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-8A0A0A6YYG3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-8A0A0A6YYG3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
TRBV6-8A0A0A6YYG3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-8A0A0A6YYG3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
TRBV6-8A0A0A6YYG3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-8A0A0A6YYG3 AC090877.2-201ENST00000558441 1738 ntBASIC16.11■□□□□ 0.17
TRBV6-8A0A0A6YYG3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC16.11■□□□□ 0.17
TRBV6-8A0A0A6YYG3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-8A0A0A6YYG3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBV6-8A0A0A6YYG3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-8A0A0A6YYG3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBV6-8A0A0A6YYG3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-8A0A0A6YYG3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-8A0A0A6YYG3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
TRBV6-8A0A0A6YYG3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-8A0A0A6YYG3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
TRBV6-8A0A0A6YYG3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-8A0A0A6YYG3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-8A0A0A6YYG3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-8A0A0A6YYG3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-8A0A0A6YYG3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-8A0A0A6YYG3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-8A0A0A6YYG3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-8A0A0A6YYG3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-8A0A0A6YYG3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.09■□□□□ 0.17
TRBV6-8A0A0A6YYG3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TRBV6-8A0A0A6YYG3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-8A0A0A6YYG3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC16.09■□□□□ 0.17
TRBV6-8A0A0A6YYG3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRBV6-8A0A0A6YYG3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-8A0A0A6YYG3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV6-8A0A0A6YYG3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRBV6-8A0A0A6YYG3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TRBV6-8A0A0A6YYG3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC16.08■□□□□ 0.16
TRBV6-8A0A0A6YYG3 HYI-210ENST00000486909 905 ntTSL 5 BASIC16.08■□□□□ 0.16
TRBV6-8A0A0A6YYG3 AC129492.7-201ENST00000622992 756 ntBASIC16.08■□□□□ 0.16
TRBV6-8A0A0A6YYG3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-8A0A0A6YYG3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
TRBV6-8A0A0A6YYG3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-8A0A0A6YYG3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TRBV6-8A0A0A6YYG3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-8A0A0A6YYG3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TRBV6-8A0A0A6YYG3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-8A0A0A6YYG3 ABCB10P4-201ENST00000566803 2184 ntBASIC16.07■□□□□ 0.16
TRBV6-8A0A0A6YYG3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRBV6-8A0A0A6YYG3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC16.07■□□□□ 0.16
TRBV6-8A0A0A6YYG3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRBV6-8A0A0A6YYG3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-8A0A0A6YYG3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV6-8A0A0A6YYG3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
TRBV6-8A0A0A6YYG3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRBV6-8A0A0A6YYG3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRBV6-8A0A0A6YYG3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV6-8A0A0A6YYG3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV6-8A0A0A6YYG3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-8A0A0A6YYG3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-8A0A0A6YYG3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRBV6-8A0A0A6YYG3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV6-8A0A0A6YYG3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-8A0A0A6YYG3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-8A0A0A6YYG3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-8A0A0A6YYG3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
TRBV6-8A0A0A6YYG3 KRT18P60-201ENST00000312876 1297 ntBASIC16.06■□□□□ 0.16
TRBV6-8A0A0A6YYG3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-8A0A0A6YYG3 LONRF2P2-201ENST00000439212 571 ntBASIC16.06■□□□□ 0.16
TRBV6-8A0A0A6YYG3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC16.06■□□□□ 0.16
TRBV6-8A0A0A6YYG3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-8A0A0A6YYG3 ABHD17AP5-201ENST00000580133 923 ntBASIC16.05■□□□□ 0.16
TRBV6-8A0A0A6YYG3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV6-8A0A0A6YYG3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.05■□□□□ 0.16
TRBV6-8A0A0A6YYG3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV6-8A0A0A6YYG3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-8A0A0A6YYG3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-8A0A0A6YYG3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-8A0A0A6YYG3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-8A0A0A6YYG3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-8A0A0A6YYG3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-8A0A0A6YYG3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-8A0A0A6YYG3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-8A0A0A6YYG3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRBV6-8A0A0A6YYG3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-8A0A0A6YYG3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC16.04■□□□□ 0.16
TRBV6-8A0A0A6YYG3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBV6-8A0A0A6YYG3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-8A0A0A6YYG3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBV6-8A0A0A6YYG3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-8A0A0A6YYG3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms