Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 AC002310.6-201ENST00000624451 1377 ntBASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
NDUFAF3Q9BU61 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
NDUFAF3Q9BU61 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
NDUFAF3Q9BU61 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 AC006504.4-201ENST00000592118 1568 ntBASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 RPS15P9-201ENST00000494093 319 ntBASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 PGAM5P1-201ENST00000518923 814 ntBASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 GGTLC5P-201ENST00000617623 998 ntBASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 AL645728.1-201ENST00000366221 2101 ntBASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 AL591122.2-201ENST00000624125 1853 ntBASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
NDUFAF3Q9BU61 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 AC140479.7-201ENST00000636301 2332 ntBASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms