Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
VRK2Q86Y07 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VRK2Q86Y07 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.41□□□□□ -0.1
VRK2Q86Y07 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.41□□□□□ -0.1
VRK2Q86Y07 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VRK2Q86Y07 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VRK2Q86Y07 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
VRK2Q86Y07 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
VRK2Q86Y07 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
VRK2Q86Y07 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VRK2Q86Y07 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.41□□□□□ -0.1
VRK2Q86Y07 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VRK2Q86Y07 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VRK2Q86Y07 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.41□□□□□ -0.1
VRK2Q86Y07 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.41□□□□□ -0.1
VRK2Q86Y07 PCDHA3-202ENST00000532566 4594 ntBASIC14.41□□□□□ -0.1
VRK2Q86Y07 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.41□□□□□ -0.1
VRK2Q86Y07 TUBB3P1-201ENST00000405796 1332 ntBASIC14.41□□□□□ -0.1
VRK2Q86Y07 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK2Q86Y07 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK2Q86Y07 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VRK2Q86Y07 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VRK2Q86Y07 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK2Q86Y07 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VRK2Q86Y07 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK2Q86Y07 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
VRK2Q86Y07 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK2Q86Y07 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
VRK2Q86Y07 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.4□□□□□ -0.1
VRK2Q86Y07 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
VRK2Q86Y07 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.4□□□□□ -0.1
VRK2Q86Y07 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
VRK2Q86Y07 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
VRK2Q86Y07 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VRK2Q86Y07 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
VRK2Q86Y07 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK2Q86Y07 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK2Q86Y07 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK2Q86Y07 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK2Q86Y07 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK2Q86Y07 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK2Q86Y07 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VRK2Q86Y07 MIR1233-2-201ENST00000408138 82 ntBASIC14.4□□□□□ -0.1
VRK2Q86Y07 MIR1233-1-201ENST00000408722 82 ntBASIC14.4□□□□□ -0.1
VRK2Q86Y07 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.4□□□□□ -0.1
VRK2Q86Y07 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.4□□□□□ -0.1
VRK2Q86Y07 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VRK2Q86Y07 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.4□□□□□ -0.1
VRK2Q86Y07 HLA-V-204ENST00000476601 1289 ntBASIC14.4□□□□□ -0.1
VRK2Q86Y07 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK2Q86Y07 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.4□□□□□ -0.1
VRK2Q86Y07 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.4□□□□□ -0.1
VRK2Q86Y07 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
VRK2Q86Y07 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.4□□□□□ -0.1
VRK2Q86Y07 LINC01115-203ENST00000606068 577 ntBASIC14.4□□□□□ -0.1
VRK2Q86Y07 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.4□□□□□ -0.1
VRK2Q86Y07 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.4□□□□□ -0.1
VRK2Q86Y07 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK2Q86Y07 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK2Q86Y07 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK2Q86Y07 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK2Q86Y07 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK2Q86Y07 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK2Q86Y07 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
VRK2Q86Y07 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
VRK2Q86Y07 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.4□□□□□ -0.1
VRK2Q86Y07 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK2Q86Y07 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.4□□□□□ -0.1
VRK2Q86Y07 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
VRK2Q86Y07 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
VRK2Q86Y07 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
VRK2Q86Y07 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
VRK2Q86Y07 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 CICP23-201ENST00000605013 2741 ntBASIC14.39□□□□□ -0.11
VRK2Q86Y07 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.39□□□□□ -0.11
VRK2Q86Y07 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
VRK2Q86Y07 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.39□□□□□ -0.11
VRK2Q86Y07 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.39□□□□□ -0.11
VRK2Q86Y07 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.39□□□□□ -0.11
VRK2Q86Y07 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
VRK2Q86Y07 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.39□□□□□ -0.11
VRK2Q86Y07 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms