Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 KRT18P34-201ENST00000488218 1270 ntBASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 AL035252.4-201ENST00000624174 288 ntBASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 AL513210.1-201ENST00000629608 234 ntBASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 AL645728.2-201ENST00000641974 660 ntBASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 FAM86GP-201ENST00000448322 971 ntBASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 AC073439.1-201ENST00000624121 1774 ntBASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCM2LQ9NUG4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 AC109322.1-201ENST00000524499 1264 ntBASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 AC105339.1-204ENST00000636249 355 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms