Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 OR2I1P-210ENST00000642037 4691 ntBASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 AC007292.2-201ENST00000593524 1812 ntBASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 TSSK5P-201ENST00000423978 907 ntBASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 AC004890.2-204ENST00000481968 304 ntBASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 SERBP1P5-201ENST00000510079 1181 ntBASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 AC018529.1-201ENST00000613063 361 ntBASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 AC139749.1-202ENST00000617529 3139 ntBASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 AC007686.3-201ENST00000619017 3487 ntBASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 KRT18P34-201ENST00000488218 1270 ntBASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 PRYP6-201ENST00000514804 343 ntBASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 AC105233.2-201ENST00000523697 349 ntBASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 AC027369.6-201ENST00000525520 931 ntBASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 AF228730.5-201ENST00000530288 346 ntBASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 AC073389.1-201ENST00000595595 795 ntBASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 AC239800.4-201ENST00000603712 296 ntBASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 AL138828.2-201ENST00000615812 383 ntBASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 AC008761.3-201ENST00000624803 892 ntBASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 AC100757.3-201ENST00000622361 1406 ntBASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
DDX49Q9Y6V7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms