Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 AC073347.1-201ENST00000421633 2643 ntBASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 RPL7P3-201ENST00000441388 714 ntBASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 AC012441.1-201ENST00000446669 685 ntBASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 AC026410.3-201ENST00000514280 936 ntBASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 AL583810.1-201ENST00000553344 1045 ntBASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 AC013268.4-201ENST00000637413 2228 ntBASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 TSPY26P-202ENST00000565928 3884 ntBASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHKBP1Q8TBC3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 MTHFR-217ENST00000641820 1569 ntBASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 CSF2RBP1-201ENST00000447905 391 ntBASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 AC106760.1-201ENST00000508690 800 ntBASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 AC011477.6-201ENST00000604980 1927 ntBASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 AC134312.5-201ENST00000568031 1313 ntBASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 DRD5P1-201ENST00000456605 1438 ntBASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHKBP1Q8TBC3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SHKBP1Q8TBC3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.33■□□□□ 0.21
SHKBP1Q8TBC3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SHKBP1Q8TBC3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.33■□□□□ 0.21
SHKBP1Q8TBC3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SHKBP1Q8TBC3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SHKBP1Q8TBC3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
SHKBP1Q8TBC3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms