Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC12.05□□□□□ -0.48
RAB4AP20338 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.05□□□□□ -0.48
RAB4AP20338 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.05□□□□□ -0.48
RAB4AP20338 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
RAB4AP20338 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.05□□□□□ -0.48
RAB4AP20338 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC12.05□□□□□ -0.48
RAB4AP20338 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.05□□□□□ -0.48
RAB4AP20338 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
RAB4AP20338 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
RAB4AP20338 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC12.05□□□□□ -0.48
RAB4AP20338 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC12.05□□□□□ -0.48
RAB4AP20338 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC12.05□□□□□ -0.48
RAB4AP20338 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC12.05□□□□□ -0.48
RAB4AP20338 DENND3-207ENST00000518347 850 ntTSL 2 BASIC12.05□□□□□ -0.48
RAB4AP20338 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC12.05□□□□□ -0.48
RAB4AP20338 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC12.05□□□□□ -0.48
RAB4AP20338 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC12.05□□□□□ -0.48
RAB4AP20338 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC12.05□□□□□ -0.48
RAB4AP20338 TERC-201ENST00000602385 541 ntBASIC12.05□□□□□ -0.48
RAB4AP20338 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
RAB4AP20338 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
RAB4AP20338 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 C18orf15-201ENST00000623680 2534 ntBASIC12.05□□□□□ -0.48
RAB4AP20338 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
RAB4AP20338 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.05□□□□□ -0.48
RAB4AP20338 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.05□□□□□ -0.48
RAB4AP20338 AL359881.3-201ENST00000602640 1721 ntBASIC12.05□□□□□ -0.48
RAB4AP20338 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC12.05□□□□□ -0.48
RAB4AP20338 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
RAB4AP20338 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.05□□□□□ -0.48
RAB4AP20338 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
RAB4AP20338 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
RAB4AP20338 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
RAB4AP20338 AC148477.5-201ENST00000625164 1645 ntBASIC12.04□□□□□ -0.48
RAB4AP20338 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.04□□□□□ -0.48
RAB4AP20338 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.04□□□□□ -0.48
RAB4AP20338 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC12.04□□□□□ -0.48
RAB4AP20338 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.04□□□□□ -0.48
RAB4AP20338 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.04□□□□□ -0.48
RAB4AP20338 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
RAB4AP20338 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC12.04□□□□□ -0.48
RAB4AP20338 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.04□□□□□ -0.48
RAB4AP20338 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
RAB4AP20338 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.04□□□□□ -0.48
RAB4AP20338 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
RAB4AP20338 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.04□□□□□ -0.48
RAB4AP20338 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC12.04□□□□□ -0.48
RAB4AP20338 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC12.04□□□□□ -0.48
RAB4AP20338 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 AL020989.1-201ENST00000422979 469 ntBASIC12.04□□□□□ -0.48
RAB4AP20338 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC12.04□□□□□ -0.48
RAB4AP20338 ATP5G1P1-201ENST00000448724 379 ntBASIC12.04□□□□□ -0.48
RAB4AP20338 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms