RNA–Protein interactions for RNA: ENST00000299687.9

ZNF407-201, Transcript of zinc finger protein 407, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF407, Length 7,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407-201ENST00000299687 DCAF8L2P0C7V8 631 aa20.71■□□□□ 0.91
ZNF407-201ENST00000299687 PELP1Q8IZL8 1130 aaKnown RBP20.04■□□□□ 0.8
ZNF407-201ENST00000299687 FAM9AQ8IZU1 332 aaPredicted RBP19.44■□□□□ 0.7
ZNF407-201ENST00000299687 ERICH6Q7L0X2 663 aa19.32■□□□□ 0.68
ZNF407-201ENST00000299687 APLP2Q06481 763 aa19.23■□□□□ 0.67
ZNF407-201ENST00000299687 SUPT5HO00267 1087 aaKnown RBP19.19■□□□□ 0.66
ZNF407-201ENST00000299687 EHMT2Q96KQ7 1210 aa19.16■□□□□ 0.66
ZNF407-201ENST00000299687 CCER1Q8TC90 406 aaPredicted RBP19.15■□□□□ 0.66
ZNF407-201ENST00000299687 CENPBP07199 599 aaPredicted RBP18.63■□□□□ 0.57
ZNF407-201ENST00000299687 SHROOM4Q9ULL8 1493 aa18.6■□□□□ 0.57
ZNF407-201ENST00000299687 MYT1Q01538 1121 aa18.58■□□□□ 0.57
ZNF407-201ENST00000299687 TTBK1Q5TCY1 1321 aaPredicted RBP18.56■□□□□ 0.56
ZNF407-201ENST00000299687 NEFLP07196 543 aa18.53■□□□□ 0.56
ZNF407-201ENST00000299687 ATP1B4Q9UN42 357 aaPredicted RBP18.46■□□□□ 0.55
ZNF407-201ENST00000299687 PCGF6Q9BYE7 350 aa18.42■□□□□ 0.54
ZNF407-201ENST00000299687 DAXXQ9UER7 740 aaPredicted RBP18.42■□□□□ 0.54
ZNF407-201ENST00000299687 YTHDC1Q96MU7 727 aaKnown RBP18.3■□□□□ 0.52
ZNF407-201ENST00000299687 RANGAP1P46060 587 aaPredicted RBP18.29■□□□□ 0.52
ZNF407-201ENST00000299687 MYT1LQ9UL68 1186 aa18.14■□□□□ 0.49
ZNF407-201ENST00000299687 ZEB1P37275 1124 aaPredicted RBP18.13■□□□□ 0.49
ZNF407-201ENST00000299687 NISCHQ9Y2I1 1504 aa18.09■□□□□ 0.49
ZNF407-201ENST00000299687 UBTFP17480 764 aaKnown RBP17.96■□□□□ 0.47
ZNF407-201ENST00000299687 POLR3GLQ9BT43 218 aa17.89■□□□□ 0.45
ZNF407-201ENST00000299687 ZNF316A6NFI3 1004 aaPredicted RBP17.87■□□□□ 0.45
ZNF407-201ENST00000299687 TRIM41Q8WV44 630 aa17.85■□□□□ 0.45
ZNF407-201ENST00000299687 SLC4A1APQ9BWU0 796 aaKnown RBP17.8■□□□□ 0.44
ZNF407-201ENST00000299687 CLSPNQ9HAW4 1339 aa17.79■□□□□ 0.44
ZNF407-201ENST00000299687 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.78■□□□□ 0.44
ZNF407-201ENST00000299687 HNRNPUL2Q1KMD3 747 aaKnown RBP17.78■□□□□ 0.44
ZNF407-201ENST00000299687 RTL5Q5HYW3 569 aaPredicted RBP17.77■□□□□ 0.44
ZNF407-201ENST00000299687 CHIC1Q5VXU3 224 aa17.75■□□□□ 0.43
ZNF407-201ENST00000299687 CNGB1Q14028 1251 aaPredicted RBP17.68■□□□□ 0.42
ZNF407-201ENST00000299687 ZBTB47Q9UFB7 747 aaPredicted RBP17.49■□□□□ 0.39
ZNF407-201ENST00000299687 ITGAEP38570 1179 aa17.47■□□□□ 0.39
ZNF407-201ENST00000299687 PPARGC1BQ86YN6 1023 aaKnown RBP17.42■□□□□ 0.38
ZNF407-201ENST00000299687 SLC24A1O60721 1099 aa17.36■□□□□ 0.37
ZNF407-201ENST00000299687 BCL11AQ9H165 835 aa17.28■□□□□ 0.36
ZNF407-201ENST00000299687 NEFMP07197 916 aa17.2■□□□□ 0.34
ZNF407-201ENST00000299687 BCANQ96GW7 911 aa17.17■□□□□ 0.34
ZNF407-201ENST00000299687 TRIM26Q12899 539 aaPredicted RBP17.15■□□□□ 0.34
ZNF407-201ENST00000299687 CANXP27824 592 aaKnown RBP17.11■□□□□ 0.33
ZNF407-201ENST00000299687 HRCP23327 699 aa17.09■□□□□ 0.33
ZNF407-201ENST00000299687 ANP32BQ92688 251 aaKnown RBP17.09■□□□□ 0.33
ZNF407-201ENST00000299687 CDK11AQ9UQ88 783 aaPredicted RBP17.08■□□□□ 0.32
ZNF407-201ENST00000299687 TRIM52Q96A61 297 aa17.05■□□□□ 0.32
ZNF407-201ENST00000299687 EIF5BO60841 1220 aaKnown RBP17.01■□□□□ 0.31
ZNF407-201ENST00000299687 FAM50AQ14320 339 aaKnown RBP17■□□□□ 0.31
ZNF407-201ENST00000299687 GLIPR1L2Q4G1C9 344 aa16.94■□□□□ 0.3
ZNF407-201ENST00000299687 HSP90AA1P07900 732 aaKnown RBP16.93■□□□□ 0.3
ZNF407-201ENST00000299687 DIEXFQ68CQ4 756 aaKnown RBP16.92■□□□□ 0.3
ZNF407-201ENST00000299687 ESF1Q9H501 851 aaKnown RBP16.91■□□□□ 0.3
ZNF407-201ENST00000299687 CDK11BP21127 795 aaKnown RBP16.89■□□□□ 0.29
ZNF407-201ENST00000299687 ANP32AP39687 249 aaKnown RBP16.89■□□□□ 0.29
ZNF407-201ENST00000299687 ZNF326Q5BKZ1 582 aaKnown RBP16.88■□□□□ 0.29
ZNF407-201ENST00000299687 ANP32CO43423 234 aa16.85■□□□□ 0.29
ZNF407-201ENST00000299687 NEUROD1Q13562 356 aa16.83■□□□□ 0.28
ZNF407-201ENST00000299687 FBLN2P98095 1184 aa16.79■□□□□ 0.28
ZNF407-201ENST00000299687 NPM2Q86SE8 214 aaKnown RBP16.78■□□□□ 0.28
ZNF407-201ENST00000299687 UPF2Q9HAU5 1272 aaKnown RBP16.73■□□□□ 0.27
ZNF407-201ENST00000299687 STAG3Q9UJ98 1225 aa16.73■□□□□ 0.27
ZNF407-201ENST00000299687 GTF3C3Q9Y5Q9 886 aa16.63■□□□□ 0.25
ZNF407-201ENST00000299687 PLPPR3Q6T4P5 718 aa16.62■□□□□ 0.25
ZNF407-201ENST00000299687 ARXQ96QS3 562 aa16.57■□□□□ 0.24
ZNF407-201ENST00000299687 SCAF1Q9H7N4 1312 aaKnown RBP16.56■□□□□ 0.24
ZNF407-201ENST00000299687 A0A0G2JS52 829 aa16.56■□□□□ 0.24
ZNF407-201ENST00000299687 LOC105371045A0A1W2PR82 267 aa16.55■□□□□ 0.24
ZNF407-201ENST00000299687 CHGAP10645 457 aaKnown RBP16.5■□□□□ 0.23
ZNF407-201ENST00000299687 NPM1P06748 294 aaKnown RBP eCLIP16.49■□□□□ 0.23
ZNF407-201ENST00000299687 TNNT2P45379 298 aaPredicted RBP16.46■□□□□ 0.23
ZNF407-201ENST00000299687 ZNF777Q9ULD5 760 aaPredicted RBP16.45■□□□□ 0.22
ZNF407-201ENST00000299687 TULP1O00294 542 aaPredicted RBP16.44■□□□□ 0.22
ZNF407-201ENST00000299687 NBR1Q14596 966 aa16.41■□□□□ 0.22
ZNF407-201ENST00000299687 MYH16Q9H6N6 1097 aa16.41■□□□□ 0.22
ZNF407-201ENST00000299687 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.4■□□□□ 0.22
ZNF407-201ENST00000299687 TRIM44Q96DX7 344 aaPredicted RBP16.36■□□□□ 0.21
ZNF407-201ENST00000299687 NCLP19338 710 aaKnown RBP16.35■□□□□ 0.21
ZNF407-201ENST00000299687 ZRSR1Q15695 479 aaKnown RBP16.34■□□□□ 0.21
ZNF407-201ENST00000299687 ARID3CA6NKF2 412 aa16.33■□□□□ 0.21
ZNF407-201ENST00000299687 SALL2Q9Y467 1007 aaPredicted RBP16.3■□□□□ 0.2
ZNF407-201ENST00000299687 HAP1P54257 671 aaPredicted RBP16.29■□□□□ 0.2
ZNF407-201ENST00000299687 NCBP3Q53F19 620 aaKnown RBP16.28■□□□□ 0.2
ZNF407-201ENST00000299687 FKBP8Q14318 412 aa16.28■□□□□ 0.2
ZNF407-201ENST00000299687 WDR43Q15061 677 aaKnown RBP eCLIP16.26■□□□□ 0.19
ZNF407-201ENST00000299687 C14orf37Q86TY3 774 aa16.26■□□□□ 0.19
ZNF407-201ENST00000299687 DNTTIP2Q5QJE6 756 aaKnown RBP16.26■□□□□ 0.19
ZNF407-201ENST00000299687 PABPN1Q86U42 306 aaKnown RBP eCLIP16.26■□□□□ 0.19
ZNF407-201ENST00000299687 ZBTB7CA1YPR0 619 aa16.25■□□□□ 0.19
ZNF407-201ENST00000299687 CCDC136Q96JN2 1154 aa16.24■□□□□ 0.19
ZNF407-201ENST00000299687 PTMAP06454 111 aaKnown RBP16.22■□□□□ 0.19
ZNF407-201ENST00000299687 P3H3Q8IVL6 736 aa16.22■□□□□ 0.19
ZNF407-201ENST00000299687 NPHP1O15259 732 aa16.22■□□□□ 0.19
ZNF407-201ENST00000299687 GOLGA6L22H0YM25 854 aa16.21■□□□□ 0.19
ZNF407-201ENST00000299687 FAM9BQ8IZU0 186 aa16.2■□□□□ 0.18
ZNF407-201ENST00000299687 HNRNPUQ00839 825 aaKnown RBP eCLIP16.2■□□□□ 0.18
ZNF407-201ENST00000299687 TONSLQ96HA7 1378 aa16.2■□□□□ 0.18
ZNF407-201ENST00000299687 ANP32EQ9BTT0 268 aa16.18■□□□□ 0.18
ZNF407-201ENST00000299687 TMC1Q8TDI8 760 aa16.17■□□□□ 0.18
ZNF407-201ENST00000299687 BECN1Q14457 450 aa16.17■□□□□ 0.18
ZNF407-201ENST00000299687 PLEKHG5O94827 1062 aa16.15■□□□□ 0.18
ZNF407-201ENST00000299687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.14■□□□□ 0.175e-7■■□□□ 12.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms