Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC11.92□□□□□ -0.5
TCRAP04437 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
TCRAP04437 AC105233.2-201ENST00000523697 349 ntBASIC11.92□□□□□ -0.5
TCRAP04437 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC11.92□□□□□ -0.5
TCRAP04437 SDHD-206ENST00000528182 754 ntTSL 3 BASIC11.92□□□□□ -0.5
TCRAP04437 AF228730.5-201ENST00000530288 346 ntBASIC11.92□□□□□ -0.5
TCRAP04437 TPM1-226ENST00000560959 925 ntTSL 2 BASIC11.92□□□□□ -0.5
TCRAP04437 ARL16-209ENST00000573715 763 ntTSL 3 BASIC11.92□□□□□ -0.5
TCRAP04437 ARL16-211ENST00000576135 694 ntTSL 3 BASIC11.92□□□□□ -0.5
TCRAP04437 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC11.92□□□□□ -0.5
TCRAP04437 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC11.92□□□□□ -0.5
TCRAP04437 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
TCRAP04437 MED16-214ENST00000617672 554 ntTSL 5 BASIC11.92□□□□□ -0.5
TCRAP04437 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC11.92□□□□□ -0.5
TCRAP04437 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
TCRAP04437 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC11.92□□□□□ -0.5
TCRAP04437 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
TCRAP04437 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 POLL-206ENST00000370172 2308 ntTSL 2 BASIC11.92□□□□□ -0.5
TCRAP04437 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC11.92□□□□□ -0.5
TCRAP04437 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 AL136982.4-201ENST00000437689 1740 ntBASIC11.91□□□□□ -0.5
TCRAP04437 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRAP04437 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TCRAP04437 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRAP04437 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRAP04437 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRAP04437 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRAP04437 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC11.91□□□□□ -0.5
TCRAP04437 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC11.91□□□□□ -0.5
TCRAP04437 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRAP04437 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC11.91□□□□□ -0.5
TCRAP04437 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
TCRAP04437 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
TCRAP04437 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRAP04437 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRAP04437 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
TCRAP04437 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC11.91□□□□□ -0.5
TCRAP04437 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TCRAP04437 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRAP04437 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC11.91□□□□□ -0.5
TCRAP04437 ACE3P-201ENST00000423435 1973 ntBASIC11.91□□□□□ -0.5
TCRAP04437 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TCRAP04437 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
TCRAP04437 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRAP04437 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRAP04437 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC11.91□□□□□ -0.5
TCRAP04437 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRAP04437 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
TCRAP04437 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
TCRAP04437 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TCRAP04437 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
TCRAP04437 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRAP04437 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC11.91□□□□□ -0.5
TCRAP04437 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRAP04437 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC11.91□□□□□ -0.5
TCRAP04437 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRAP04437 USP35-204ENST00000530267 2419 ntTSL 2 BASIC11.91□□□□□ -0.5
TCRAP04437 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRAP04437 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRAP04437 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRAP04437 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TCRAP04437 AC117489.1-201ENST00000625169 3217 ntBASIC11.91□□□□□ -0.5
TCRAP04437 ABR-228ENST00000574437 3196 ntTSL 5 BASIC11.91□□□□□ -0.5
TCRAP04437 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC11.91□□□□□ -0.5
TCRAP04437 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRAP04437 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC11.91□□□□□ -0.5
TCRAP04437 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC11.91□□□□□ -0.5
TCRAP04437 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRAP04437 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC11.91□□□□□ -0.5
TCRAP04437 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC11.91□□□□□ -0.5
TCRAP04437 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TCRAP04437 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRAP04437 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
TCRAP04437 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC11.9□□□□□ -0.5
TCRAP04437 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
TCRAP04437 PCDHGB8P-201ENST00000502926 1973 ntBASIC11.9□□□□□ -0.5
TCRAP04437 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC11.9□□□□□ -0.5
TCRAP04437 BANP-203ENST00000393207 2438 ntTSL 2 BASIC11.9□□□□□ -0.5
TCRAP04437 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
TCRAP04437 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TCRAP04437 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TCRAP04437 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TCRAP04437 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC11.9□□□□□ -0.5
TCRAP04437 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.9□□□□□ -0.5
TCRAP04437 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
TCRAP04437 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC11.9□□□□□ -0.5
TCRAP04437 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC11.9□□□□□ -0.5
TCRAP04437 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms