Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COPS3Q9UNS2 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COPS3Q9UNS2 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COPS3Q9UNS2 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COPS3Q9UNS2 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COPS3Q9UNS2 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.99□□□□□ -0.17
COPS3Q9UNS2 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
COPS3Q9UNS2 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.99□□□□□ -0.17
COPS3Q9UNS2 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COPS3Q9UNS2 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COPS3Q9UNS2 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
COPS3Q9UNS2 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COPS3Q9UNS2 AL359183.1-201ENST00000623796 2132 ntBASIC13.99□□□□□ -0.17
COPS3Q9UNS2 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COPS3Q9UNS2 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.99□□□□□ -0.17
COPS3Q9UNS2 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COPS3Q9UNS2 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COPS3Q9UNS2 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COPS3Q9UNS2 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 MIR346-201ENST00000362234 95 ntBASIC13.98□□□□□ -0.17
COPS3Q9UNS2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 MED15P5-201ENST00000423150 992 ntBASIC13.98□□□□□ -0.17
COPS3Q9UNS2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 SPCS2P4-201ENST00000436160 681 ntBASIC13.98□□□□□ -0.17
COPS3Q9UNS2 KRT18P3-201ENST00000451602 1288 ntBASIC13.98□□□□□ -0.17
COPS3Q9UNS2 AL139010.1-201ENST00000454878 894 ntBASIC13.98□□□□□ -0.17
COPS3Q9UNS2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 LINC01225-203ENST00000563550 1244 ntBASIC13.98□□□□□ -0.17
COPS3Q9UNS2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.98□□□□□ -0.17
COPS3Q9UNS2 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
COPS3Q9UNS2 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 ZNF259P1-201ENST00000407656 1365 ntBASIC13.97□□□□□ -0.17
COPS3Q9UNS2 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 LINC00552-201ENST00000625151 2579 ntBASIC13.97□□□□□ -0.17
COPS3Q9UNS2 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 AC007292.2-201ENST00000593524 1812 ntBASIC13.97□□□□□ -0.17
COPS3Q9UNS2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COPS3Q9UNS2 HLA-H-201ENST00000383620 1096 ntBASIC13.97□□□□□ -0.17
COPS3Q9UNS2 AL590627.1-203ENST00000421194 1026 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms