Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CBX1P83916 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CBX1P83916 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.35■□□□□ 0.21
CBX1P83916 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.35■□□□□ 0.21
CBX1P83916 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CBX1P83916 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CBX1P83916 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC16.35■□□□□ 0.21
CBX1P83916 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CBX1P83916 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC16.35■□□□□ 0.21
CBX1P83916 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CBX1P83916 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.35■□□□□ 0.21
CBX1P83916 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBX1P83916 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBX1P83916 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBX1P83916 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.35■□□□□ 0.21
CBX1P83916 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.35■□□□□ 0.21
CBX1P83916 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.35■□□□□ 0.21
CBX1P83916 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.35■□□□□ 0.21
CBX1P83916 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.35■□□□□ 0.21
CBX1P83916 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.35■□□□□ 0.21
CBX1P83916 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBX1P83916 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBX1P83916 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
CBX1P83916 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.35■□□□□ 0.21
CBX1P83916 TOP3BP1-201ENST00000420768 1380 ntBASIC16.35■□□□□ 0.21
CBX1P83916 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC16.35■□□□□ 0.21
CBX1P83916 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.35■□□□□ 0.21
CBX1P83916 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC16.35■□□□□ 0.21
CBX1P83916 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.35■□□□□ 0.21
CBX1P83916 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBX1P83916 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX1P83916 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CBX1P83916 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.34■□□□□ 0.21
CBX1P83916 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX1P83916 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC16.34■□□□□ 0.21
CBX1P83916 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX1P83916 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC16.34■□□□□ 0.21
CBX1P83916 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX1P83916 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX1P83916 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CBX1P83916 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.34■□□□□ 0.21
CBX1P83916 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.34■□□□□ 0.21
CBX1P83916 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CBX1P83916 CCR12P-201ENST00000446203 998 ntBASIC16.34■□□□□ 0.21
CBX1P83916 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.34■□□□□ 0.21
CBX1P83916 AP003733.1-201ENST00000491725 852 ntBASIC16.34■□□□□ 0.21
CBX1P83916 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CBX1P83916 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CBX1P83916 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CBX1P83916 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.34■□□□□ 0.21
CBX1P83916 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CBX1P83916 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CBX1P83916 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
CBX1P83916 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CBX1P83916 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CBX1P83916 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX1P83916 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.34■□□□□ 0.21
CBX1P83916 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX1P83916 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX1P83916 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX1P83916 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX1P83916 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX1P83916 AC243591.1-201ENST00000452967 1364 ntBASIC16.34■□□□□ 0.21
CBX1P83916 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CBX1P83916 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX1P83916 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.34■□□□□ 0.21
CBX1P83916 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX1P83916 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.34■□□□□ 0.21
CBX1P83916 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CBX1P83916 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CBX1P83916 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX1P83916 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.33■□□□□ 0.21
CBX1P83916 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC16.33■□□□□ 0.21
CBX1P83916 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CBX1P83916 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.33■□□□□ 0.21
CBX1P83916 AC073548.1-201ENST00000624088 1882 ntBASIC16.33■□□□□ 0.21
CBX1P83916 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CBX1P83916 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CBX1P83916 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CBX1P83916 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CBX1P83916 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CBX1P83916 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
CBX1P83916 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.33■□□□□ 0.21
CBX1P83916 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
CBX1P83916 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CBX1P83916 AC138969.2-201ENST00000532739 9932 ntBASIC16.33■□□□□ 0.2
CBX1P83916 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CBX1P83916 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC16.33■□□□□ 0.2
CBX1P83916 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CBX1P83916 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBX1P83916 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBX1P83916 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBX1P83916 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CBX1P83916 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBX1P83916 AC003669.1-201ENST00000334569 611 ntBASIC16.33■□□□□ 0.2
CBX1P83916 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.33■□□□□ 0.2
CBX1P83916 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBX1P83916 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
CBX1P83916 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.33■□□□□ 0.2
CBX1P83916 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms