RNA–Protein interactions for RNA: ENST00000340096.10

OFD1-201, Transcript of OFD1, centriole and centriolar satellite protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene OFD1, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OFD1-201ENST00000340096 NISCHQ9Y2I1 1504 aa23.07■■□□□ 1.28
OFD1-201ENST00000340096 HRCP23327 699 aa22.21■■□□□ 1.15
OFD1-201ENST00000340096 PELP1Q8IZL8 1130 aaKnown RBP22.16■■□□□ 1.14
OFD1-201ENST00000340096 PPARGC1BQ86YN6 1023 aaKnown RBP21.76■■□□□ 1.07
OFD1-201ENST00000340096 PCGF6Q9BYE7 350 aa21.63■■□□□ 1.05
OFD1-201ENST00000340096 MYT1Q01538 1121 aa21.45■■□□□ 1.02
OFD1-201ENST00000340096 SCAF1Q9H7N4 1312 aaKnown RBP21.24■□□□□ 0.99
OFD1-201ENST00000340096 SUPT5HO00267 1087 aaKnown RBP21.23■□□□□ 0.99
OFD1-201ENST00000340096 SHROOM4Q9ULL8 1493 aa21.07■□□□□ 0.96
OFD1-201ENST00000340096 MYO15BQ96JP2 1530 aa21.03■□□□□ 0.96
OFD1-201ENST00000340096 CHIC1Q5VXU3 224 aa20.91■□□□□ 0.94
OFD1-201ENST00000340096 ZEB1P37275 1124 aaPredicted RBP20.78■□□□□ 0.92
OFD1-201ENST00000340096 TRIM26Q12899 539 aaPredicted RBP20.76■□□□□ 0.91
OFD1-201ENST00000340096 DCAF1Q9Y4B6 1507 aa20.73■□□□□ 0.91
OFD1-201ENST00000340096 ACIN1Q9UKV3 1341 aaKnown RBP20.63■□□□□ 0.89
OFD1-201ENST00000340096 NEUROD1Q13562 356 aa20.54■□□□□ 0.88
OFD1-201ENST00000340096 LOC105371045A0A1W2PR82 267 aa20.53■□□□□ 0.88
OFD1-201ENST00000340096 GTF3C3Q9Y5Q9 886 aa20.53■□□□□ 0.88
OFD1-201ENST00000340096 CCDC180Q9P1Z9 1646 aa20.51■□□□□ 0.87
OFD1-201ENST00000340096 CENPBP07199 599 aaPredicted RBP20.41■□□□□ 0.86
OFD1-201ENST00000340096 TTBK1Q5TCY1 1321 aaPredicted RBP20.19■□□□□ 0.82
OFD1-201ENST00000340096 DIEXFQ68CQ4 756 aaKnown RBP20.08■□□□□ 0.81
OFD1-201ENST00000340096 BCL11AQ9H165 835 aa19.98■□□□□ 0.79
OFD1-201ENST00000340096 CCER1Q8TC90 406 aaPredicted RBP19.92■□□□□ 0.78
OFD1-201ENST00000340096 YTHDC1Q96MU7 727 aaKnown RBP19.9■□□□□ 0.78
OFD1-201ENST00000340096 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.88■□□□□ 0.77
OFD1-201ENST00000340096 FAM9AQ8IZU1 332 aaPredicted RBP19.78■□□□□ 0.76
OFD1-201ENST00000340096 ANP32EQ9BTT0 268 aa19.71■□□□□ 0.75
OFD1-201ENST00000340096 EHMT2Q96KQ7 1210 aa19.67■□□□□ 0.74
OFD1-201ENST00000340096 ZCCHC6Q5VYS8 1495 aaKnown RBP19.67■□□□□ 0.74
OFD1-201ENST00000340096 TRIM41Q8WV44 630 aa19.62■□□□□ 0.73
OFD1-201ENST00000340096 DCAF8L2P0C7V8 631 aa19.58■□□□□ 0.73
OFD1-201ENST00000340096 ZNF316A6NFI3 1004 aaPredicted RBP19.56■□□□□ 0.72
OFD1-201ENST00000340096 CSRNP3Q8WYN3 585 aa19.5■□□□□ 0.71
OFD1-201ENST00000340096 MIER1Q8N108 512 aa19.49■□□□□ 0.71
OFD1-201ENST00000340096 PRKCSHP14314 528 aaPredicted RBP19.44■□□□□ 0.7
OFD1-201ENST00000340096 TSHZ2Q9NRE2 1034 aa19.41■□□□□ 0.7
OFD1-201ENST00000340096 SUPT16HQ9Y5B9 1047 aaKnown RBP19.38■□□□□ 0.69
OFD1-201ENST00000340096 CLSPNQ9HAW4 1339 aa19.33■□□□□ 0.68
OFD1-201ENST00000340096 ERICH6Q7L0X2 663 aa19.12■□□□□ 0.65
OFD1-201ENST00000340096 BCANQ96GW7 911 aa19.04■□□□□ 0.64
OFD1-201ENST00000340096 RBM19Q9Y4C8 960 aaKnown RBP18.94■□□□□ 0.62
OFD1-201ENST00000340096 HNRNPUL2Q1KMD3 747 aaKnown RBP18.86■□□□□ 0.61
OFD1-201ENST00000340096 FKBP8Q14318 412 aa18.86■□□□□ 0.61
OFD1-201ENST00000340096 RSF1Q96T23 1441 aaPredicted RBP18.8■□□□□ 0.6
OFD1-201ENST00000340096 WRNQ14191 1432 aaPredicted RBP eCLIP18.77■□□□□ 0.6
OFD1-201ENST00000340096 NEFLP07196 543 aa18.76■□□□□ 0.59
OFD1-201ENST00000340096 RB1CC1Q8TDY2 1594 aa18.76■□□□□ 0.59
OFD1-201ENST00000340096 ABCC9O60706 1549 aa18.76■□□□□ 0.59
OFD1-201ENST00000340096 MSH5O43196 834 aa18.75■□□□□ 0.59
OFD1-201ENST00000340096 APLP2Q06481 763 aa18.72■□□□□ 0.59
OFD1-201ENST00000340096 ITGAEP38570 1179 aa18.7■□□□□ 0.58
OFD1-201ENST00000340096 ANO8Q9HCE9 1232 aaPredicted RBP18.7■□□□□ 0.58
OFD1-201ENST00000340096 CEP162Q5TB80 1403 aa18.67■□□□□ 0.58
OFD1-201ENST00000340096 MYT1LQ9UL68 1186 aa18.67■□□□□ 0.58
OFD1-201ENST00000340096 DEKP35659 375 aaKnown RBP18.66■□□□□ 0.58
OFD1-201ENST00000340096 KCNH8Q96L42 1107 aa18.62■□□□□ 0.57
OFD1-201ENST00000340096 FANCIQ9NVI1 1328 aa18.57■□□□□ 0.56
OFD1-201ENST00000340096 UBTFP17480 764 aaKnown RBP18.56■□□□□ 0.56
OFD1-201ENST00000340096 CDK11AQ9UQ88 783 aaPredicted RBP18.5■□□□□ 0.55
OFD1-201ENST00000340096 TNIKQ9UKE5 1360 aa18.48■□□□□ 0.55
OFD1-201ENST00000340096 SALL2Q9Y467 1007 aaPredicted RBP18.48■□□□□ 0.55
OFD1-201ENST00000340096 CCDC136Q96JN2 1154 aa18.42■□□□□ 0.54
OFD1-201ENST00000340096 TRIM52Q96A61 297 aa18.41■□□□□ 0.54
OFD1-201ENST00000340096 NBR1Q14596 966 aa18.4■□□□□ 0.54
OFD1-201ENST00000340096 ERICH6BQ5W0A0 696 aa18.4■□□□□ 0.54
OFD1-201ENST00000340096 DHX57Q6P158 1386 aaKnown RBP18.33■□□□□ 0.53
OFD1-201ENST00000340096 DDX10Q13206 875 aaKnown RBP18.31■□□□□ 0.52
OFD1-201ENST00000340096 IRX6P78412 446 aaPredicted RBP18.28■□□□□ 0.52
OFD1-201ENST00000340096 RTN4Q9NQC3 1192 aaKnown RBP18.27■□□□□ 0.52
OFD1-201ENST00000340096 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.27■□□□□ 0.51
OFD1-201ENST00000340096 UBE2Q2Q8WVN8 375 aa18.25■□□□□ 0.51
OFD1-201ENST00000340096 SOGA1O94964 1423 aa18.25■□□□□ 0.51
OFD1-201ENST00000340096 CCDC88BA6NC98 1476 aa18.25■□□□□ 0.51
OFD1-201ENST00000340096 RTL5Q5HYW3 569 aaPredicted RBP18.25■□□□□ 0.51
OFD1-201ENST00000340096 NOP58Q9Y2X3 529 aaKnown RBP18.25■□□□□ 0.51
OFD1-201ENST00000340096 SCRIBQ14160 1630 aa18.25■□□□□ 0.51
OFD1-201ENST00000340096 ABCC8Q09428 1581 aa18.23■□□□□ 0.51
OFD1-201ENST00000340096 IL27Q8NEV9 243 aa18.21■□□□□ 0.51
OFD1-201ENST00000340096 GOLGA3Q08378 1498 aa18.18■□□□□ 0.5
OFD1-201ENST00000340096 ANP32CO43423 234 aa18.18■□□□□ 0.5
OFD1-201ENST00000340096 CCER2I3L3R5 266 aa18.14■□□□□ 0.49
OFD1-201ENST00000340096 PAK3O75914 559 aaPredicted RBP18.14■□□□□ 0.49
OFD1-201ENST00000340096 EEA1Q15075 1411 aa18.13■□□□□ 0.49
OFD1-201ENST00000340096 RANGAP1P46060 587 aaPredicted RBP18.13■□□□□ 0.49
OFD1-201ENST00000340096 CLIP1P30622 1438 aa18.11■□□□□ 0.49
OFD1-201ENST00000340096 CECR2Q9BXF3 1484 aa18.11■□□□□ 0.49
OFD1-201ENST00000340096 RUSC2Q8N2Y8 1516 aa18.09■□□□□ 0.49
OFD1-201ENST00000340096 MROH2BQ7Z745 1585 aa18.09■□□□□ 0.49
OFD1-201ENST00000340096 VPS8Q8N3P4 1428 aa18.09■□□□□ 0.49
OFD1-201ENST00000340096 PPP4R2Q9NY27 417 aa18.09■□□□□ 0.49
OFD1-201ENST00000340096 HNRNPUQ00839 825 aaKnown RBP eCLIP18.07■□□□□ 0.48
OFD1-201ENST00000340096 EIF5BO60841 1220 aaKnown RBP18.06■□□□□ 0.48
OFD1-201ENST00000340096 PPP1R15AO75807 674 aaPredicted RBP18.05■□□□□ 0.48
OFD1-201ENST00000340096 WIZO95785 1651 aa18.03■□□□□ 0.48
OFD1-201ENST00000340096 HIRIP3Q9BW71 556 aaPredicted RBP18.03■□□□□ 0.48
OFD1-201ENST00000340096 ANP32AP39687 249 aaKnown RBP18.02■□□□□ 0.48
OFD1-201ENST00000340096 B4GALNT3Q6L9W6 998 aa18.02■□□□□ 0.48
OFD1-201ENST00000340096 EIF4G1Q04637 1599 aaKnown RBP18.02■□□□□ 0.48
OFD1-201ENST00000340096 ZBTB47Q9UFB7 747 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms