RNA–Protein interactions for RNA: ENST00000611048.4

ARHGEF4-217, Transcript of Rho guanine nucleotide exchange factor 4, humanhuman

TSL 5 BASIC

Gene ARHGEF4, Length 3,486 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4-217ENST00000611048 NISCHQ9Y2I1 1504 aa26.61■■□□□ 1.85
ARHGEF4-217ENST00000611048 SHROOM4Q9ULL8 1493 aa23.04■■□□□ 1.28
ARHGEF4-217ENST00000611048 SUPT5HO00267 1087 aaKnown RBP22.84■■□□□ 1.25
ARHGEF4-217ENST00000611048 HRCP23327 699 aa22.84■■□□□ 1.25
ARHGEF4-217ENST00000611048 MYO15BQ96JP2 1530 aa22.66■■□□□ 1.22
ARHGEF4-217ENST00000611048 ZCCHC6Q5VYS8 1495 aaKnown RBP22.65■■□□□ 1.22
ARHGEF4-217ENST00000611048 CHIC1Q5VXU3 224 aa22.53■■□□□ 1.2
ARHGEF4-217ENST00000611048 CCDC180Q9P1Z9 1646 aa22.39■■□□□ 1.17
ARHGEF4-217ENST00000611048 PCGF6Q9BYE7 350 aa22.39■■□□□ 1.17
ARHGEF4-217ENST00000611048 PPARGC1BQ86YN6 1023 aaKnown RBP22.24■■□□□ 1.15
ARHGEF4-217ENST00000611048 DCAF1Q9Y4B6 1507 aa22.24■■□□□ 1.15
ARHGEF4-217ENST00000611048 LOC105371045A0A1W2PR82 267 aa21.86■■□□□ 1.09
ARHGEF4-217ENST00000611048 TRIM26Q12899 539 aaPredicted RBP21.85■■□□□ 1.09
ARHGEF4-217ENST00000611048 DCAF8L2P0C7V8 631 aa21.77■■□□□ 1.08
ARHGEF4-217ENST00000611048 PELP1Q8IZL8 1130 aaKnown RBP21.69■■□□□ 1.06
ARHGEF4-217ENST00000611048 ZEB1P37275 1124 aaPredicted RBP21.64■■□□□ 1.05
ARHGEF4-217ENST00000611048 ABCC9O60706 1549 aa21.5■■□□□ 1.03
ARHGEF4-217ENST00000611048 SCAF1Q9H7N4 1312 aaKnown RBP21.41■■□□□ 1.02
ARHGEF4-217ENST00000611048 RSF1Q96T23 1441 aaPredicted RBP21.27■□□□□ 0.99
ARHGEF4-217ENST00000611048 TRIM41Q8WV44 630 aa21.23■□□□□ 0.99
ARHGEF4-217ENST00000611048 RB1CC1Q8TDY2 1594 aa21.17■□□□□ 0.98
ARHGEF4-217ENST00000611048 FAM9AQ8IZU1 332 aaPredicted RBP21.08■□□□□ 0.96
ARHGEF4-217ENST00000611048 SCRIBQ14160 1630 aa21.06■□□□□ 0.96
ARHGEF4-217ENST00000611048 ACIN1Q9UKV3 1341 aaKnown RBP21■□□□□ 0.95
ARHGEF4-217ENST00000611048 NEUROD1Q13562 356 aa20.91■□□□□ 0.94
ARHGEF4-217ENST00000611048 EHMT2Q96KQ7 1210 aa20.86■□□□□ 0.93
ARHGEF4-217ENST00000611048 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.84■□□□□ 0.93
ARHGEF4-217ENST00000611048 CCER1Q8TC90 406 aaPredicted RBP20.82■□□□□ 0.92
ARHGEF4-217ENST00000611048 MYT1Q01538 1121 aa20.79■□□□□ 0.92
ARHGEF4-217ENST00000611048 CENPBP07199 599 aaPredicted RBP20.77■□□□□ 0.92
ARHGEF4-217ENST00000611048 DIEXFQ68CQ4 756 aaKnown RBP20.75■□□□□ 0.91
ARHGEF4-217ENST00000611048 GTF3C3Q9Y5Q9 886 aa20.75■□□□□ 0.91
ARHGEF4-217ENST00000611048 MROH2BQ7Z745 1585 aa20.72■□□□□ 0.91
ARHGEF4-217ENST00000611048 CECR2Q9BXF3 1484 aa20.71■□□□□ 0.91
ARHGEF4-217ENST00000611048 EIF4G1Q04637 1599 aaKnown RBP20.69■□□□□ 0.9
ARHGEF4-217ENST00000611048 WIZO95785 1651 aa20.65■□□□□ 0.9
ARHGEF4-217ENST00000611048 WRNQ14191 1432 aaPredicted RBP eCLIP20.65■□□□□ 0.9
ARHGEF4-217ENST00000611048 BAZ1AQ9NRL2 1556 aaPredicted RBP20.6■□□□□ 0.89
ARHGEF4-217ENST00000611048 NACADO15069 1562 aa20.53■□□□□ 0.88
ARHGEF4-217ENST00000611048 CEP162Q5TB80 1403 aa20.48■□□□□ 0.87
ARHGEF4-217ENST00000611048 ZNF316A6NFI3 1004 aaPredicted RBP20.46■□□□□ 0.87
ARHGEF4-217ENST00000611048 CCDC88BA6NC98 1476 aa20.4■□□□□ 0.86
ARHGEF4-217ENST00000611048 TNIKQ9UKE5 1360 aa20.4■□□□□ 0.86
ARHGEF4-217ENST00000611048 ABCC8Q09428 1581 aa20.39■□□□□ 0.85
ARHGEF4-217ENST00000611048 TTBK1Q5TCY1 1321 aaPredicted RBP20.36■□□□□ 0.85
ARHGEF4-217ENST00000611048 TOP2AP11388 1531 aaKnown RBP20.34■□□□□ 0.85
ARHGEF4-217ENST00000611048 EEA1Q15075 1411 aa20.29■□□□□ 0.84
ARHGEF4-217ENST00000611048 SOGA1O94964 1423 aa20.29■□□□□ 0.84
ARHGEF4-217ENST00000611048 YTHDC1Q96MU7 727 aaKnown RBP20.27■□□□□ 0.84
ARHGEF4-217ENST00000611048 SMARCA2P51531 1590 aa20.25■□□□□ 0.83
ARHGEF4-217ENST00000611048 MIER1Q8N108 512 aa20.23■□□□□ 0.83
ARHGEF4-217ENST00000611048 GOLGA3Q08378 1498 aa20.19■□□□□ 0.82
ARHGEF4-217ENST00000611048 CSRNP3Q8WYN3 585 aa20.18■□□□□ 0.82
ARHGEF4-217ENST00000611048 RUSC2Q8N2Y8 1516 aa20.17■□□□□ 0.82
ARHGEF4-217ENST00000611048 SMARCA4P51532 1647 aa20.17■□□□□ 0.82
ARHGEF4-217ENST00000611048 UBTFP17480 764 aaKnown RBP20.13■□□□□ 0.81
ARHGEF4-217ENST00000611048 HNRNPUL2Q1KMD3 747 aaKnown RBP20.04■□□□□ 0.8
ARHGEF4-217ENST00000611048 KIF21BO75037 1637 aa20.03■□□□□ 0.8
ARHGEF4-217ENST00000611048 CEP164Q9UPV0 1460 aa20.01■□□□□ 0.79
ARHGEF4-217ENST00000611048 CLSPNQ9HAW4 1339 aa20■□□□□ 0.79
ARHGEF4-217ENST00000611048 VPS8Q8N3P4 1428 aa19.97■□□□□ 0.79
ARHGEF4-217ENST00000611048 CLIP1P30622 1438 aa19.97■□□□□ 0.79
ARHGEF4-217ENST00000611048 BAZ1BQ9UIG0 1483 aaKnown RBP19.9■□□□□ 0.78
ARHGEF4-217ENST00000611048 SYNJ1O43426 1573 aa19.88■□□□□ 0.77
ARHGEF4-217ENST00000611048 SUPT16HQ9Y5B9 1047 aaKnown RBP19.87■□□□□ 0.77
ARHGEF4-217ENST00000611048 UNC13AQ9UPW8 1703 aa19.86■□□□□ 0.77
ARHGEF4-217ENST00000611048 DHX57Q6P158 1386 aaKnown RBP19.81■□□□□ 0.76
ARHGEF4-217ENST00000611048 APLP2Q06481 763 aa19.81■□□□□ 0.76
ARHGEF4-217ENST00000611048 RAPGEF2Q9Y4G8 1499 aa19.78■□□□□ 0.76
ARHGEF4-217ENST00000611048 PEG3Q9GZU2 1588 aa19.76■□□□□ 0.75
ARHGEF4-217ENST00000611048 TSHZ2Q9NRE2 1034 aa19.71■□□□□ 0.75
ARHGEF4-217ENST00000611048 ANP32EQ9BTT0 268 aa19.64■□□□□ 0.73
ARHGEF4-217ENST00000611048 CUX2O14529 1486 aa19.63■□□□□ 0.73
ARHGEF4-217ENST00000611048 ARAP1Q96P48 1450 aa19.61■□□□□ 0.73
ARHGEF4-217ENST00000611048 RRBP1Q9P2E9 1410 aaKnown RBP19.61■□□□□ 0.73
ARHGEF4-217ENST00000611048 ERICH3Q5RHP9 1530 aa19.6■□□□□ 0.73
ARHGEF4-217ENST00000611048 TOP2BQ02880 1626 aa19.58■□□□□ 0.73
ARHGEF4-217ENST00000611048 RANGAP1P46060 587 aaPredicted RBP19.56■□□□□ 0.72
ARHGEF4-217ENST00000611048 BICRAQ9NZM4 1560 aa19.55■□□□□ 0.72
ARHGEF4-217ENST00000611048 PRXQ9BXM0 1461 aa19.53■□□□□ 0.72
ARHGEF4-217ENST00000611048 KANK4Q5T7N3 995 aaPredicted RBP19.53■□□□□ 0.72
ARHGEF4-217ENST00000611048 BIVM-ERCC5R4GMW8 1640 aa19.52■□□□□ 0.72
ARHGEF4-217ENST00000611048 ATAD2BQ9ULI0 1458 aa19.48■□□□□ 0.71
ARHGEF4-217ENST00000611048 CCNB3Q8WWL7 1395 aa19.46■□□□□ 0.71
ARHGEF4-217ENST00000611048 KCNH8Q96L42 1107 aa19.45■□□□□ 0.7
ARHGEF4-217ENST00000611048 MAPKBP1O60336 1514 aa19.43■□□□□ 0.7
ARHGEF4-217ENST00000611048 PABPN1Q86U42 306 aaKnown RBP eCLIP19.39■□□□□ 0.69
ARHGEF4-217ENST00000611048 BCL11AQ9H165 835 aa19.37■□□□□ 0.69
ARHGEF4-217ENST00000611048 RAB3GAP2Q9H2M9 1393 aa19.36■□□□□ 0.69
ARHGEF4-217ENST00000611048 BCANQ96GW7 911 aa19.36■□□□□ 0.69
ARHGEF4-217ENST00000611048 FKBP8Q14318 412 aa19.35■□□□□ 0.69
ARHGEF4-217ENST00000611048 ARHGAP35Q9NRY4 1499 aa19.33■□□□□ 0.69
ARHGEF4-217ENST00000611048 WDR97A6NE52 1622 aa19.3■□□□□ 0.68
ARHGEF4-217ENST00000611048 KIF27Q86VH2 1401 aa19.27■□□□□ 0.68
ARHGEF4-217ENST00000611048 ITGAEP38570 1179 aa19.27■□□□□ 0.67
ARHGEF4-217ENST00000611048 MAP3K1Q13233 1512 aa19.26■□□□□ 0.67
ARHGEF4-217ENST00000611048 RBM19Q9Y4C8 960 aaKnown RBP19.26■□□□□ 0.67
ARHGEF4-217ENST00000611048 SETD5Q9C0A6 1442 aa19.26■□□□□ 0.67
ARHGEF4-217ENST00000611048 DDX10Q13206 875 aaKnown RBP19.26■□□□□ 0.67
ARHGEF4-217ENST00000611048 CUX1P39880 1505 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms